open-traits-network / open-traits-network.github.io

Open Traits Network Registry and Website
https://opentraits.org
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Please add EOL-hosted datasets (batch 1 of 3) to the OTN dataset registry #231

Closed jhammock closed 1 year ago

jhammock commented 1 year ago

Please fill out the template below and click "submit" to request a trait dataset to the Open Traits Network. Please allow for some time for @open-traits-network/editors to review your submission.

---
layout: dataset
id: kubitzki-et-al
name: Kubitzki et al
contentURL: https://opendata.eol.org/dataset/803079fd-5eec-4487-83b0-1ee4b6568a24/resource/f0ebbdce-2a87-4a22-aec2-bf5902a8fb71/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/kubitzki-et-al
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: extinction status|fruit shape|leaf venation shape|stem diameter|leaf size|leaf complexity|leaf venation structure|leaf sheddability|fruit distribution|plant lifeform|plant growth 
form|reproduction|has toxin|native range includes|gametophyte|geographic distribution|habitat|sexual system|plant height|stem morphology|leaf shape|fruit type|life cycle habit|leaf arrangement|fruit position|trophic guild|photosynthetic pathway|spore arrangement
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Cellular Organisms
eventDate:
paperDOIcitation: 
description: The Families and Genera of Vascular Plants. Kubitzki, Klaus, Editor. Dataset transcribed by hand and processed in OpenRefine.
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: elofsson-1965
name: Elofsson, 1965
contentURL: https://opendata.eol.org/dataset/16510c3b-8615-4492-9334-d0a6902de667/resource/f46e19b0-6a44-4c74-be6b-0d18731d2ac7/download/elofsson1965.zip
datasetDOI_URL: https://opendata.eol.org/dataset/elofsson-1965
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: visual system
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Malacostraca
eventDate:
paperDOIcitation: https://doi.org/10.1080/00364827.1965.10409549
description: Rolf Elofsson (1965) The nauplius eye and frontal organs in malagostraca (crustacea), Sarsia, 19:1, 1-54, DOI: 10.1080/00364827.1965.10409549  https://doi.org/10.1080/00364827.1965.10409549
taxaList: Anaspidacea|Euphausiacea|Stomatopoda
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: hotchkiss-2000
name: Hotchkiss, 2000
contentURL: https://opendata.eol.org/dataset/8307ec0a-a500-48f0-bcaa-6c5c94cb8ce8/resource/4c2e8e18-6bbe-4950-905a-e3960355cd9a/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/hotchkiss-2000
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body symmetry
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Asteroidea
eventDate:
paperDOIcitation: https://doi.org/10.1093/icb/40.3.340
description: Frederick H. C. Hotchkiss, On the Number of Rays in Starfish, American Zoologist, Volume 40, Issue 3, June 2000, Pages 340,Aei354, https://doi.org/10.1093/icb/40.3.340
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: starko-2019
name: Starko, 2019
contentURL: https://opendata.eol.org/dataset/83ce6363-c00b-49f5-be91-fb978cdff22e/resource/cbdfde47-b157-4e6e-82b3-dee735c3d1a4/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/starko-2019
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: plant growth form|sexual system
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Phaeophyceae
eventDate:
paperDOIcitation: https://dx.doi.org/10.14288/1.0378025 
description: Starko, S. (2019). Morphological and functional diversification during kelp evolution (T). University of British Columbia. https://dx.doi.org/10.14288/1.0378025   
taxaList: Akkesiphycus lubricus|Laminariales
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: marine-ecology-literature
name: marine ecology literature
contentURL: https://opendata.eol.org/dataset/86081133-3db1-4ffc-8b1f-2bbba1d1f948/resource/e56f7eff-6b71-4f92-92e1-558a82d55df8/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/marine-ecology-literature
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body length|diet|ecomorphological guild|forms|geographic distribution|trophic level|motility|habitat|have host|are endoparasites of|kleptoparasitize|trophic guild|burrow depth|burrow diameter
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Eukaryota
eventDate:
paperDOIcitation: 
description: A collection, from the literature, of traits relating to trophic guild, habitat and host relationships of marine invertebrates
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: mineralogy
name: Mineralogy
contentURL: https://opendata.eol.org/dataset/a028d4c9-4bc9-4103-9321-6d0b3c448896/resource/bdc6cfde-250e-4536-b102-c016ee0a3b70/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/mineralogy
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: skeleton structure|skeleton contains|mineralized tissue contains|mineralized skeleton contains
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Cellular Organisms
eventDate:
paperDOIcitation: 
description: A collection, from the literature and from individual experts, of traits relating to mineralogy of hard parts of organisms, chiefly calcified tissues.
taxalist: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: dunn-et-al-2015
name: Dunn et al, 2015
contentURL: https://opendata.eol.org/dataset/7195e9d9-ad49-48f8-96df-95d2934cbf79/resource/3396fd83-87e0-4a90-8fa0-35cf5a070c55/download/dunnetal2015.zip
datasetDOI_URL: https://opendata.eol.org/dataset/dunn-et-al-2015
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body symmetry
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Metazoa
eventDate:
paperDOIcitation: https://doi.org/10.1016/j.tree.2015.03.003
description: Dunn, C.W., Leys, S.P. and Haddock, S.H., 2015. The hidden biology of sponges and ctenophores. Trends in ecology & evolution, 30(5), pp.282-291. https://doi.org/10.1016/j.tree.2015.03.003
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: chia-1966
name: Chia, 1966
contentURL: https://opendata.eol.org/dataset/f091573f-570d-459a-a4d2-dfb6f140ae4c/resource/b8bf712d-c7cf-41f1-a6cd-b4b7d06ceb2e/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/chia-1966
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body symmetry
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Asteriidae
eventDate:
paperDOIcitation: https://doi.org/10.2307/2411987
description: Chia, Fu-Shiang. ,AeuSystematics of the Six-Rayed Sea Star, Leptasterias, in the Vicinity of San Juan Island, Washington.,Aeu Systematic Zoology, vol. 15, no. 4, 1966, pp. 300,Aei06. JSTOR, https://doi.org/10.2307/2411987. Accessed 30 May 2022.
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: berking-2007
name: Berking, 2007
contentURL: https://opendata.eol.org/dataset/789f6454-fe7a-477d-849a-b3c9d39f1527/resource/b0a2bc29-b09c-4764-856c-f9f9596c6794/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/berking-2007
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body symmetry
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Cnidaria
eventDate:
paperDOIcitation: 
description: Berking, S., 2007. Generation of bilateral symmetry in Anthozoa: a model. Journal of theoretical biology, 246(3), pp.477-490.
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: von-konrat-et-al-2008
name: Von Konrat et al, 2008
contentURL: https://opendata.eol.org/dataset/74b7da87-c8f0-4ec6-aede-e42f614b9fe2/resource/f2042042-0381-41ce-a4b3-e1edebfd9751/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/von-konrat-et-al-2008
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: ploidy
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Eukaryota
eventDate:
paperDOIcitation: 
description: Part II: Bryophyte Life History. In: Von Konrat, M. and Huhndorf, S.M., 2008. In celebration of Dr. John J. Engel: a tribute to 40 years in bryology. https://www.biodiversitylibrary.org/bibliography/169237
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: webb-2019
name: Webb 2019
contentURL: https://opendata.eol.org/dataset/f79725d8-1abd-4f75-89b9-999d8a0eab46/resource/8b2fe3a7-7c02-4f3f-991c-dd05a7fe6c8d/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/webb-2019
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: forms
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Eukaryota
eventDate:
paperDOIcitation: 
description: Webb, P. 2019. Ocean Sediments. In: Introduction to Oceanography, P.Webb, 2019. LibreTexts (GeoSciences).  https://geo.libretexts.org/Bookshelves/Oceanography/Book%3A_Introduction_to_Oceanography_(Webb)/12%3A_Ocean_Sediments
taxaList: Coccosphaerales|Diatomeae|Foraminifera|Radiolaria
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: queiros-et-al-2013
name: Queir/>=s et al, 2013
contentURL: https://opendata.eol.org/dataset/001f1ae9-0adb-4908-a92b-e9cee998c765/resource/cea3da44-2a57-46c4-a6e1-374c062a5f31/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/queiros-et-al-2013
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: ecomorphological guild|motility|ecosystem engineering
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Metazoa
eventDate:
paperDOIcitation: https://doi.org/10.1002/ece3.769
description: Ana M. Queir/>=s Silvana N. R. Birchenough Julie Bremner Jasmin A. Godbold Ruth E. Parker Alicia Romero,AeeRamirez Henning Reiss Martin Solan Paul J. Somerfield Carl Van Colen Gert Van Hoey Stephen Widdicombe. 2013. A bioturbation classification of European marine infaunal invertebrates. Ecology and Evolution 2013; 3( 11): 3958,Aei 3985. https://doi.org/10.1002/ece3.769
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: sorensen-et-al-2008
name: Sorensen et al, 2008
contentURL: https://opendata.eol.org/dataset/0928a11a-2e63-401d-b7e0-f1ccb6fedee6/resource/47239cb1-61cf-4cc8-9a53-866cbf3c96b5/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/sorensen-et-al-2008
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body shape
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Ecdysozoa
eventDate:
paperDOIcitation: https://doi.org/10.1111/j.1439-0469.2008.00478.x
description: S/PIrensen, M.V., Hebsgaard, M.B., Heiner, I., Glenner, H., Willerslev, E. and Kristensen, R.M., 2008. New data from an enigmatic phylum: evidence from molecular sequence data supports a sister,Aeegroup relationship between Loricifera and Nematomorpha. Journal of Zoological Systematics and Evolutionary Research, 46(3), pp.231-239. https://doi.org/10.1111/j.1439-0469.2008.00478.x
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: emig-1985
name: Emig, 1985
contentURL: https://opendata.eol.org/dataset/c7e2d8e4-0b14-4fc9-aed6-1ef98fe2ebf1/resource/7e2ff5f1-a4ea-4d6e-9dd7-6a531d0cdad2/download/emig.zip
datasetDOI_URL: https://opendata.eol.org/dataset/emig-1985
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body shape|ecomorphological guild
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Spiralia
eventDate:
paperDOIcitation: 
description: C. C. Emig (1985). Phylogenetic systematics in Phoronida (Lophophorata). , 23(3), 184,Aei193. doi:10.1111/j.1439-0469.1985.tb00581.x
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: fuchs-et-al-2010
name: Fuchs et al, 2010
contentURL: https://opendata.eol.org/dataset/dc8449e5-d43a-43e8-8d03-c87c7b9adb32/resource/3b2ba122-9294-41b5-a24e-44fff1edcd16/download/fuchs.zip
datasetDOI_URL: https://opendata.eol.org/dataset/fuchs-et-al-2010
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body shape|body organization
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Spiralia
eventDate:
paperDOIcitation: https://doi.org/10.1016/j.ympev.2010.04.009
description: Fuchs, J., Iseto, T., Hirose, M., Sundberg, P. and Obst, M., 2010. The first internal molecular phylogeny of the animal phylum Entoprocta (Kamptozoa). Molecular phylogenetics and evolution, 56(1), pp.370-379. https://doi.org/10.1016/j.ympev.2010.04.009
taxaList: Barentsiidae|Entoprocta|Loxokalypodidae|Loxosomatidae|Pedicellinidae
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: littlewood-and-bray-2000
name: Littlewood and Bray, 2000
contentURL: https://opendata.eol.org/dataset/e7cb3357-225f-4836-9f67-c756d1e4d09f/resource/7470fa3a-5ee1-4d64-9be4-2319a9b26999/download/littlewood.zip
datasetDOI_URL: https://opendata.eol.org/dataset/littlewood-and-bray-2000
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body shape|body symmetry
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Bilateria
eventDate:
paperDOIcitation: 
description: Littlewood, D.T.J. and Bray, R.A. eds., 2000. Interrelationships of the Platyhelminthes. CRC Press. https://books.google.com/books?id=IURZDwAAQBAJ
taxaList: Platyhelminthes|Xenoturbellidae
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: suzuki-et-al-2010
name: Suzuki et al, 2010
contentURL: https://opendata.eol.org/dataset/f475d869-ef30-4c96-bc3d-ebd7cd03b8e0/resource/001aa773-d59e-4a3f-88bf-68f7baf2ce5c/download/suzuki.zip
datasetDOI_URL: https://opendata.eol.org/dataset/suzuki-et-al-2010
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body shape|ecomorphological guild|have host
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Spiralia
eventDate:
paperDOIcitation: https://doi.org/10.1645/GE-2305.1
description: Takahito G. Suzuki, Kazutoyo Ogino, Kazuhiko Tsuneki, Hidetaka Furuya "Phylogenetic Analysis of Dicyemid Mesozoans (Phylum Dicyemida) From Innexin Amino Acid Sequences: Dicyemids Are Not Related to Platyhelminthes," Journal of Parasitology, 96(3), 614-625, (1 June 2010). https://doi.org/10.1645/GE-2305.1
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: halanych-1996
name: Halanych, 1996
contentURL: https://opendata.eol.org/dataset/94c506dc-9cc7-4d58-9804-b2c7ada00338/resource/0def3fc7-fd18-4c7a-9165-747dfe87f955/download/halanych.zip
datasetDOI_URL: https://opendata.eol.org/dataset/halanych-1996
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body shape
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Spiralia
eventDate:
paperDOIcitation: https://doi.org/10.1093/sysbio/45.2.223   
description: Halanych, Kenneth M. "Testing hypotheses of chaetognath origins: long branches revealed by 18S ribosomal DNA." Systematic Biology 45.2 (1996): 223-246. https://doi.org/10.1093/sysbio/45.2.223    
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: cameron-et-al-2000
name: Cameron et al, 2000
contentURL: https://opendata.eol.org/dataset/ca83de13-3ae7-49a3-b651-d953628e21d3/resource/018d6c60-c76b-451a-a526-26a52ab2a578/download/cameron.zip
datasetDOI_URL: https://opendata.eol.org/dataset/cameron-et-al-2000
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body shape|ecomorphological guild|body organization
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Hemichordata
eventDate:
paperDOIcitation: https://doi.org/10.1073%2Fpnas.97.9.4469
description: Cameron CB, Garey JR, Swalla BJ. Evolution of the chordate body plan: new insights from phylogenetic analyses of deuterostome phyla. Proc Natl Acad Sci U S A. 2000 Apr 25;97(9):4469-74. doi: 10.1073/pnas.97.9.4469. PMID: 10781046; PMCID: PMC18258. https://doi.org/10.1073%2Fpnas.97.9.4469
taxaList: Enteropneusta|Pterobranchia
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: pettibone-1982
name: Pettibone, 1982
contentURL: https://opendata.eol.org/dataset/0a92caa7-0254-4c6d-99f7-9d69482e8269/resource/89735748-78b3-4f8f-8745-c4995a3ce757/download/pettibone.zip
datasetDOI_URL: https://opendata.eol.org/dataset/pettibone-1982
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body shape|ecomorphological guild|appendages|have host|trophic guild
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Spiralia
eventDate:
paperDOIcitation: 
description: Pettibone, M.H., 1982. Annelida. Synopsis and Classification of Living Organisms, Volume 2. https://repository.si.edu/bitstream/handle/10088/3418/Pettibone-1982-chapter.pdf
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: altman-1965
name: Altman, 1965
contentURL: https://opendata.eol.org/dataset/70a40628-8d90-406d-9493-a3669466d8f6/resource/ea43348f-c05a-4e5a-bf64-7b1e48ee43bb/download/altman.zip
datasetDOI_URL: https://opendata.eol.org/dataset/altman-1965
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body shape
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Ecdysozoa
eventDate:
paperDOIcitation: https://doi.org/10.2134/agronmonogr9.2.c59
description: Altman, J., 1965. Nematodes. Methods of Soil Analysis: Part 2 Chemical and Microbiological Properties, 9, pp.1517-1523. https://doi.org/10.2134/agronmonogr9.2.c59
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: strand-and-sundberg-2015
name: Strand and Sundberg, 2015
contentURL: https://opendata.eol.org/dataset/618174b4-7897-456e-8b13-5883c9bccc61/resource/85f7ae8e-5b0f-47bd-aa48-20abc85ecd6b/download/strand.zip
datasetDOI_URL: https://opendata.eol.org/dataset/strand-and-sundberg-2015
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body shape|body symmetry
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Spiralia
eventDate:
paperDOIcitation: https://doi.org/10.1016/B978-0-12-385026-3.00011-5
description: Strand, M. and Sundberg, P., 2015. Phylum Nemertea. In Thorp and Covich's Freshwater Invertebrates (pp. 205-209). Academic Press. https://doi.org/10.1016/B978-0-12-385026-3.00011-5
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: schmidt-rhaesa-2012
name: Schmidt-Rhaesa, 2012
contentURL: https://opendata.eol.org/dataset/0d436357-3770-4f75-a4aa-276acc4e2780/resource/90ae432f-450a-45bd-a02e-4d80642b1108/download/schmidt-rhaesa.zip
datasetDOI_URL: https://opendata.eol.org/dataset/schmidt-rhaesa-2012
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body shape
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Ecdysozoa
eventDate:
paperDOIcitation: 
description: Schmidt-Rhaesa, A., 2012. Priapulida. Handbook of Zoology. Gastrotricha, Cycloneuralia and Gnathifera, 1, pp.147-180. https://books.google.com/books?id=NBP4bvxp1loC
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: boyle-and-rice-2018
name: Boyle and Rice, 2018
contentURL: https://opendata.eol.org/dataset/a0197ce3-988a-4349-a2d7-5013eae6586a/resource/e452e847-0b39-4879-9a63-d917a1ada824/download/boyle.zip
datasetDOI_URL: https://opendata.eol.org/dataset/boyle-and-rice-2018
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body shape
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Annelida
eventDate:
paperDOIcitation: https://doi.org/10.5479/si.1943-667X.42
description: Boyle, M.J. and Rice, M.E., 2018. Comparative development and the evolution of life history diversity in Sipuncula. In Proceedings of the Second International Symposium on the Biology of the Sipuncula. Smithsonian Institution Scholarly Press. https://doi.org/10.5479/si.1943-667X.42
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: littlewood-et-al-1998
name: Littlewood et al, 1998
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contactName: Jen Hammock
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taxon: Gnathifera
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paperDOIcitation: https://doi.org/10.1006/mpev.1997.0448
description: Littlewood, D.T.J., Telford, M.J., Clough, K.A. and Rohde, K., 1998. Gnathostomulida,Aeian enigmatic metazoan phylum from both morphological and molecular perspectives. Molecular Phylogenetics and Evolution, 9(1), pp.72-79. https://doi.org/10.1006/mpev.1997.0448
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paperDOIcitation: https://doi.org/10.1016/B978-0-12-385028-7.00007-X
description: K/*nneby, T., 2016. Phylum Gastrotricha. In Thorp and Covich's Freshwater Invertebrates (pp. 115-130). Academic Press. https://doi.org/10.1016/B978-0-12-385028-7.00007-X
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description: Marshall, C.R. and Valentine, J.W., 2010. The importance of preadapted genomes in the origin of the animal bodyplans and the Cambrian explosion. Evolution: International Journal of Organic Evolution, 64(5), pp.1189-1201. https://doi.org/10.1111/j.1558-5646.2009.00908.x
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name: Panganiban et al, 1997
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datasetDOI_URL: https://opendata.eol.org/dataset/panganiban-et-al-1997
contactName: Jen Hammock
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traitList: appendages
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name: Edmondst, 2000
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contactName: Jen Hammock
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taxon: Sedentaria
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contentURL: https://opendata.eol.org/dataset/5f679928-2323-44d4-995e-6b9e1550406a/resource/d6867321-964e-415a-80cb-e02205d859d0/download/alava.zip
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taxon: Syndermata
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description: ALAVA, J.J. and AGUIRRE, W.E., 2005. Scanning electron microscopy of Neoechinorhynchus sp.(Acanthocephala: Neoechinorhynchidae), a possible new species of intestinal parasite of the Tallfin croaker Micropogonias altipinnis (G/onther, 1864). Parasitolog/<>a latinoamericana, 60(1-2), pp.48-53. http://dx.doi.org/10.4067/S0717-77122005000100007
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contactName: Jen Hammock
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traitList: plant growth form|habitat
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taxon: Cellular Organisms
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description: Necchi JR, O. ed., 2016. River algae. Springer. https://www.researchgate.net/profile/Andrey-Kovalchuk-2/post/Are-there-any-books-published-in-study-of-taxonomy-of-river-phytoplankton-or-algae/attachment/59d6422b79197b807799df75/AS%3A437838266277890%401481400185816/download/Orlando+Necchi+JR+%28eds.%29-River+Algae-Springer+International+Publishing+%282016%29.pdf
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name: Yoon et al, 2006
contentURL: https://opendata.eol.org/dataset/35b5dee4-527c-48f0-99f9-dbf37f1ac9f5/resource/dd6446e5-7b63-448f-918d-2a5f9635e11e/download/yoon.zip
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description: Yoon, H.S., M/oller, K.M., Sheath, R.G., Ott, F.D. and Bhattacharya, D., 2006. Defining the major lineages of red algae (RHODOPHYTA) 1. Journal of phycology, 42(2), pp.482-492. https://doi.org/10.1111/j.1529-8817.2006.00210.x
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name: Lavrov et al, 2004
contentURL: https://opendata.eol.org/dataset/c709b9d5-3458-46cc-aa43-aaa5d0203266/resource/4f61869c-5add-40e4-9316-28d26e13c000/download/lavrov.zip
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taxon: Ichthyostraca
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paperDOIcitation: https://doi.org/10.1098/rspb.2003.2631
description: Lavrov, D.V., Brown, W.M. and Boore, J.L., 2004. Phylogenetic position of the Pentastomida and (pan) crustacean relationships. Proceedings of the Royal Society of London. Series B: Biological Sciences, 271(1538), pp.537-544. https://doi.org/10.1098/rspb.2003.2631
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name: Robin et al, 2018
contentURL: https://opendata.eol.org/dataset/30cbf102-99a9-4832-ac8b-fac4bc39e691/resource/3fadf4b9-cf64-4954-824d-5348ce9b8f62/download/robin.zip
datasetDOI_URL: https://opendata.eol.org/dataset/robin-et-al-2018
contactName: Jen Hammock
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taxon: Pholadoidea
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paperDOIcitation: https://doi.org/10.1111/pala.12376
description: Robin, N., Velasquez, M., Boura, A., Garcia, G., Jauvion, C., Boiteau, J.M., Gomez, B., Daviero,AeeGomez, V. and Valentin, X., 2018. The oldest shipworms (Bivalvia, Pholadoidea, Teredinidae) preserved with soft parts (western France): insights into the fossil record and evolution of Pholadoidea. Palaeontology, 61(6), pp.905-918. https://doi.org/10.1111/pala.12376
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id: govindarajan-et-al-2011
name: Govindarajan et al, 2011
contentURL: https://opendata.eol.org/dataset/43223429-35a6-4018-a3c0-a75442c48c09/resource/7a993670-5708-4142-b22e-398af8fff82e/download/govindarajanetal2011.zip
datasetDOI_URL: https://opendata.eol.org/dataset/govindarajan-et-al-2011
contactName: Jen Hammock
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traitList: ecomorphological guild|body organization
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taxon: Tunicata
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paperDOIcitation: https://doi.org/10.1093/plankt/fbq157
description: Annette F. Govindarajan, Ann Bucklin, Laurence P. Madin, A molecular phylogeny of the Thaliacea, Journal of Plankton Research, Volume 33, Issue 6, June 2011, Pages 843,Aei853, https://doi.org/10.1093/plankt/fbq157
taxaList: Doliolida|Pyrosomatida|Salpida|Thaliacea
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name: Shenkar et al, 2011
contentURL: https://opendata.eol.org/dataset/449026a5-fe17-46fe-988e-b7f902302efb/resource/717cc110-8cc7-4600-9649-c0517f81b4d7/download/shenkar2011.zip
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paperDOIcitation: https://doi.org/10.1371/journal.pone.0020657.s001
description: Systematic division of ascidian species following the Ascidiacea World Database. https://doi.org/10.1371/journal.pone.0020657.s001. Supplementary material from Shenkar N, Swalla BJ (2011) Global Diversity of Ascidiacea. PLoS ONE 6(6): e20657. https://doi.org/10.1371/journal.pone.0020657
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contentURL: https://opendata.eol.org/dataset/9fb29724-dd7c-4a4a-a995-21508ae837dd/resource/462bbc8c-cb9d-45b7-a92b-8aee818db38f/download/hageman2003.zip
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contactName: Jen Hammock
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license: CC0
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taxon: Spiralia
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paperDOIcitation: https://doi.org/10.1093/icb/43.1.87
description: Steven J. Hageman, Complexity Generated by Iteration of Hierarchical Modules in Bryozoa, Integrative and Comparative Biology, Volume 43, Issue 1, February 2003, Pages 87,Aei98, https://doi.org/10.1093/icb/43.1.87
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contentURL: https://opendata.eol.org/dataset/03e1ed7a-83cd-4828-88ae-4bba8ee08ffb/resource/33e8f4ad-eb0d-4bf2-a961-a6fd3a7afe4c/download/cartwright2003.zip
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contactName: Jen Hammock
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taxon: Cnidaria
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paperDOIcitation: https://doi.org/10.1093/icb/43.1.82
description: Paulyn Cartwright, Developmental Insights into the Origin of Complex colonial Hydrozoans, Integrative and Comparative Biology, Volume 43, Issue 1, February 2003, Pages 82,Aei86, https://doi.org/10.1093/icb/43.1.82
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name: Ryland, 1997
contentURL: https://opendata.eol.org/dataset/aa07e4ad-430a-4003-acf5-b2f2b408f113/resource/d472fd62-0680-4830-8f58-74385c55abd1/download/ryland1997.zip
datasetDOI_URL: https://opendata.eol.org/dataset/ryland-1997
contactName: Jen Hammock
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taxon: Sphenopidae
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description: JOHN S. RYLAND (1997) Reproduction in Zoanthidea (Anthozoa: Hexacorallia), Invertebrate Reproduction & Development, 31:1-3, 177-188, DOI: 10.1080/07924259.1997.9672575
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name: McFadden et al, 2010
contentURL: https://opendata.eol.org/dataset/2468db74-5d96-4837-9aa9-785c8e59fd8f/resource/9b7c7e56-71af-4fcc-9a6f-b88c6180ce6a/download/mcfaddenetal2010.zip
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contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: attached|body organization
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taxon: Anthozoa
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description: Catherine S. McFadden, Juan A. S/*nchez, Scott C. France, Molecular Phylogenetic Insights into the Evolution of Octocorallia: A Review, Integrative and Comparative Biology, Volume 50, Issue 3, September 2010, Pages 389,Aei410, https://doi.org/10.1093/icb/icq056
taxaList: Octocorallia|Pennatulacea|Protoalcyonaria
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name: Francis, 1979
contentURL: https://opendata.eol.org/dataset/7d31ee97-ffde-4b37-ae08-fd796df7132a/resource/64783be7-b6ee-412d-8326-39ed683a93b2/download/francis1979.zip
datasetDOI_URL: https://opendata.eol.org/dataset/francis-1979
contactName: Jen Hammock
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license: CC0
traitList: habitat|body organization
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taxon: Hexacorallia
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paperDOIcitation: https://doi.org/10.1093/icb/19.3.669
description: LISBETH FRANCIS, Contrast Between solitary and Clonal Lifestyles in the Sea Anemone Anthopleura elegantissima, American Zoologist, Volume 19, Issue 3, August 1979, Pages 669,Aei681, https://doi.org/10.1093/icb/19.3.669
taxaList: Actiniaria|Haliplanella luciae|Metridium senile fimbriatum|Phymactis clematis
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name: Genikhovich and Technau, 2017
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datasetDOI_URL: https://opendata.eol.org/dataset/genikhovich-and-technau-2017
contactName: Jen Hammock
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license: CC0
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description: Grigory Genikhovich, Ulrich Technau; On the evolution of bilaterality. Development 1 October 2017; 144 (19): 3392,Aei3404. doi: https://doi.org/10.1242/dev.141507
taxaList: Cubozoa|Hydrozoa|Scyphozoa|Staurozoa
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name: Schilthuizen and Davison, 2005
contentURL: https://opendata.eol.org/dataset/b07f363a-0639-495f-a8c9-285cea9bf906/resource/0ad5ae36-bdc7-42a1-896c-4bfb271dd6c0/download/schilthuizenetal2005.zip
datasetDOI_URL: https://opendata.eol.org/dataset/schilthuizen-and-davison-2005
contactName: Jen Hammock
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license: CC0
traitList: body symmetry
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name: Grabowsky, 1994b
contentURL: https://opendata.eol.org/dataset/5af7edc6-f991-43fb-bc1b-579f4eb87a79/resource/32d6379f-9885-4556-8a0b-cdbd096b783c/download/grabowski1994.zip
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contactName: Jen Hammock
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license: CC0
traitList: body symmetry
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taxon: Irregularia
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description: Grabowsky, G.L., 1994. Symmetry, locomotion, and the evolution of an anterior end: a lesson from sea urchins. Evolution, 48(4), pp.1130-1146.
taxaList: Cassiduloida|Clypeasteroida|Holasteroida|Holectypoida|Spatangoida
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name: Smirnov, 2014
contentURL: https://opendata.eol.org/dataset/933661a6-d976-4823-b035-1ea32e91ad8a/resource/1a784cf4-52c6-442a-ac36-00a8b7718c36/download/smirnov2014.zip
datasetDOI_URL: https://opendata.eol.org/dataset/smirnov-2014
contactName: Jen Hammock
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license: CC0
traitList: body symmetry
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taxon: Echinozoa
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paperDOIcitation: https://doi.org/10.1134/S0031030114120107
description: Smirnov, A.V. Sea cucumbers symmetry (Echinodermata: Holothuroidea). Paleontol. J. 48, 1215,Aei1236 (2014). https://doi.org/10.1134/S0031030114120107
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name: Paul and Smith,  1984
contentURL: https://opendata.eol.org/dataset/d7ebc79a-4e70-4cd3-bf2f-7fb5ef89f7c5/resource/d54b9a5a-7558-478d-a5ce-4b38610b6e3f/download/paulsmith1984.zip
datasetDOI_URL: https://opendata.eol.org/dataset/paul-and-smith-1984
contactName: Jen Hammock
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taxon: Deuterostomia
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---
layout: dataset
id: namigai-et-al-2014
name: Namigai et al, 2014
contentURL: https://opendata.eol.org/dataset/855f29d3-2648-4566-b4aa-102fe0834da8/resource/4e4b6157-1e9c-4818-b0a4-0057c2679904/download/namigaietal2014.zip
datasetDOI_URL: https://opendata.eol.org/dataset/namigai-et-al-2014
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: body symmetry
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Metazoa
eventDate:
paperDOIcitation: 
description: Namigai, E.K., Kenny, N.J. and Shimeld, S.M., 2014. Right across the tree of life: the evolution of left,Aeiright asymmetry in the Bilateria. Genesis, 52(6), pp.458-470.
taxaList: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: lewis-and-taylor-1965
name: Lewis and Taylor, 1965
contentURL: https://opendata.eol.org/dataset/10c26a35-e332-4c56-94fd-a5b39d245ff6/resource/98edf631-a461-4761-a25e-f36c6527dc46/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/lewis-and-taylor-1965
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Neoptera
eventDate:
paperDOIcitation: https://doi.org/10.1111/j.1365-2311.1965.tb02304.x
description: Lewis, T. and Taylor, L.R. (1965), Diurnal periodicity of flight by insects. Transactions of the Royal Entomological Society of London, 116: 393-435. https://doi.org/10.1111/j.1365-2311.1965.tb02304.x
taxalist: Brachycera|Cercyon unipunctatus|Cyclorrhapha|Hemiptera|Hymenoptera|Macrosteles sexnotata|Neuroptera|Orthotylus virescens|Sisyra fuscata|Thysanoptera
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: wcislo-et-al-2004
name: Wcislo et al, 2004
contentURL: https://opendata.eol.org/dataset/977ec709-de1f-469a-877d-fe9d3837e3fc/resource/8d4469c9-e85b-4f8d-955d-14a15b8e7f04/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/wcislo-et-al-2004
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Megalopta
eventDate:
paperDOIcitation: https://doi.org/10.1111/j.1095-8312.2004.00399.x
description: WILLIAM T. WCISLO, LAURA ARNESON, KARI ROESCH, VICTOR GONZALEZ, ADAM SMITH, HERM/iGENES FERN/ANDEZ, The evolution of nocturnal behaviour in sweat bees, Megalopta genalis and M. ecuadoria (Hymenoptera: Halictidae): an escape from competitors and enemies?, Biological Journal of the Linnean Society, Volume 83, Issue 3, November 2004, Pages 377,Aei387, https://doi.org/10.1111/j.1095-8312.2004.00399.x
taxalist: Megalopta ecuadoria|Megalopta genalis
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: steinbauer-and-weir-2007
name: Steinbauer and Weir, 2007
contentURL: https://opendata.eol.org/dataset/85aa0037-a25b-43f4-a879-3c1c6b5619fc/resource/4ba27900-ff7b-40d1-8354-dbf2c4a53978/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/steinbauer-and-weir-2007
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Melolonthidae
eventDate:
paperDOIcitation: https://doi.org/10.1111/j.1440-6055.2007.00579.x
description: Steinbauer, M.J. and Weir, T.A. (2007), Summer activity patterns of nocturnal Scarabaeoidea (Coleoptera) of the southern tablelands of New South Wales. Australian Journal of Entomology, 46: 7-16. https://doi.org/10.1111/j.1440-6055.2007.00579.x
taxalist: Automolius|Heteronyx|Liparetrus
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: saunders-2002
name: Saunders, 2002
contentURL: https://opendata.eol.org/dataset/9c94f2f3-17c4-4a91-858b-70b91af208be/resource/d1f9abe5-572a-47bb-bfff-0271931fbf72/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/saunders-2002
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Neoptera
eventDate:
paperDOIcitation: 
description: D.S. Saunders. 2002. Insect Clocks, Third Edition. Elsevier Science B.V. Amsterdam, The Netherlands
taxalist: Aedes aegypti|Aedes taeniorhynchus|Anopheles gambiae|Blattodea|Glossina morsitans
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: owens-and-lewis-2018
name: Owens and Lewis, 2018
contentURL: https://opendata.eol.org/dataset/ead65bae-c9d2-47dc-a385-012141819b7a/resource/2c6dd8bb-890e-4cc1-aa54-f7158963f9b5/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/owens-and-lewis-2018
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Elateroidea
eventDate:
paperDOIcitation: https://doi.org/10.1002/ece3.4557
description: Owens, ACS, Lewis, SM. The impact of artificial light at night on nocturnal insects: A review and synthesis. Ecol Evol. 2018; 8: 11337,Aei 11358. https://doi.org/10.1002/ece3.4557
taxalist: Elateridae|Lampyridae|Lucidota atra
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: mcdermott-1964
name: McDermott, 1964
contentURL: https://opendata.eol.org/dataset/ddcc8700-1e87-4e12-a2e6-59943321372b/resource/939473d7-be25-459d-99f3-7712ee1fc5ee/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/mcdermott-1964
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Lampyridae
eventDate:
paperDOIcitation: 
description: McDermott, F. (1964). The Taxonomy of the Lampyridae (Coleoptera). Transactions of the American Entomological Society (1890-), 90(1), 1-72. Retrieved January 29, 2021, from http://www.jstor.org/stable/25077867
taxalist: Alecton|Callopisma|Calyptocephalus|Ellychnia|Erythrolychnia|Lucidota|Phosphaenus|Pollaclasis
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: kawahara-et-al-2019
name: Kawahara et al, 2019
contentURL: https://opendata.eol.org/dataset/c1c82a77-b107-4d60-9da7-7399e1df4ead/resource/aac51ca6-5ef9-462c-8122-b0e2d7773e53/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/kawahara-et-al-2019
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Amphiesmenoptera
eventDate:
paperDOIcitation: 
description: Akito Y. Kawahara, David Plotkin, Marianne Espeland, Karen Meusemann, Emmanuel F. A. Toussaint, Alexander Donath, France Gimnich, Paul B. Frandsen, Andreas Zwick, Mario dos Reis, Jesse R. Barber, Ralph S. Peters, Shanlin Liu, Xin Zhou, Christoph Mayer, Lars Podsiadlowski, Caroline Storer, Jayne E. Yack, Bernhard Misof, Jesse W. Breinholt. 2019. Phylogenomics reveals the evolutionary timing and pattern of butterflies and moths.  Proceedings of the National Academy of Sciences Nov 2019, 116 (45) 22657-22663; DOI: 10.1073/pnas.1907847116
taxalist: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: gwynne-2001
name: Gwynne, 2001
contentURL: https://opendata.eol.org/dataset/f144e46f-4da3-4271-b1be-c577ec5f9525/resource/aa95d971-2d6c-40d5-a938-87072089b83e/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/gwynne-2001
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: trophic guild|behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Tettigoniidae
eventDate:
paperDOIcitation: 
description: Darryl T. Gwynne. 2001. Katydids and Bush-crickets: Reproductive Behavior and Evolution of the Tettigoniidae. Cornell University Press, Ithaca and London
taxalist: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: gilbert-1985
name: GILBERT, 1985
contentURL: https://opendata.eol.org/dataset/d91bf57a-292a-4f4c-84a7-f267c5879dd7/resource/1dc23b26-99f0-4039-95d3-056426c17a1e/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/gilbert-1985
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Cyclorrhapha
eventDate:
paperDOIcitation: https://doi.org/10.1111/j.1365-2311.1985.tb00736.x
description: GILBERT, F.S. (1985), Diurnal activity patterns in hoverflies (Diptera, Syrphidae). Ecological Entomology, 10: 385-392. https://doi.org/10.1111/j.1365-2311.1985.tb00736.x
taxalist: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: fornoff-et-al-2012
name: Fornoff et al, 2012
contentURL: https://opendata.eol.org/dataset/65e1066a-3686-4132-ad9d-c7427df3f24f/resource/ba0d92f2-98d9-4038-b1ea-382a380408ac/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/fornoff-et-al-2012
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Tettigonioidea
eventDate:
paperDOIcitation: 
description: Fornoff, Felix; Dechmann, Dina; Wikelski, Martin. 2012. Observation of movement and activity via radio-telemetry reveals diurnal behavior of the neotropical katydid Philophyllia Ingens (Orthoptera: Tettigoniidae). Ecotropica, 18 (1):27-34
taxalist: Philophyllia ingens|Tettigoniidae
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: desutter-grandcolas-1995
name: Desutter-Grandcolas, 1995
contentURL: https://opendata.eol.org/dataset/e6db812f-3571-40af-9b59-a205a36c502d/resource/d01148dd-90db-476c-bfe4-b2496ecbc5c4/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/desutter-grandcolas-1995
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: habitat|behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Phalangopsidae
eventDate:
paperDOIcitation: 
description: L. Desutter-Grandcolas. 1995. Toward the Knowledge of the Evolutionary Biology of Phalangopsid Crickets (Orthoptera: Grylloidea: Phalangopsidae): Data, Questions and Evolutionary Scenarios. Journal of Orthoptera Research, No. 4 (Aug., 1995), pp. 163-175
taxalist: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: choe-and-crespi-1997
name: Choe and Crespi, 1997
contentURL: https://opendata.eol.org/dataset/ff221590-2be0-41d3-90c8-400550971e35/resource/eec9186f-2b89-410c-90b3-06a247b15872/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/choe-and-crespi-1997
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: trophic guild|behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Endopterygota
eventDate:
paperDOIcitation: 
description: Jae C. Choe, Bernard J. Crespi. 1997. The Evolution of Mating Systems in Insects and Arachnids. Cambridge University Press, Cambridge, UK
taxalist: Anomalochrysa|Ascalaphidae|Culex territans|Mantispidae|Nemopteridae
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: borges-et-al-2016
name: Borges et al, 2016
contentURL: https://opendata.eol.org/dataset/b4331bc5-1a28-4336-be64-030c4a1f2e18/resource/60241d9c-8edf-42f4-9204-03dd94b54ed8/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/borges-et-al-2016
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Anthophila
eventDate:
paperDOIcitation: 
description: Renee M. Borges, Hema Somanathan, and Almut Kelber. 2016. Patterns and Processes in Nocturnal and Crepuscular Pollination Services. The Quarterly Review of Biology 2016 91:4, 389-418
taxalist: |Lasioglossum boreale|Lasioglossum comagenense|Lasioglossum lusorium|Lasioglossum oenotherae|Lasioglossum quebecense|Lasioglossum texanum|Lasioglossum truncatum|Megalopta|Xylocopa tranquebarica
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: ankel-simons-2008
name: Ankel-Simons 2008
contentURL: https://opendata.eol.org/dataset/e9178a70-ec78-49e1-b1af-dcf5cfbcc8df/resource/7f66063b-f9f4-4f93-b0ab-6cdd1b70c029/download/archive.zip
datasetDOI_URL: https://opendata.eol.org/dataset/ankel-simons-2008
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Primates
eventDate:
paperDOIcitation: 
description: Ankel-Simons F, Rasmussen DT. Diurnality, nocturnality, and the evolution of primate visual systems. Am J Phys Anthropol. 2008; Suppl 47:100-17. doi: 10.1002/ajpa.20957. PMID: 19003895.
taxalist: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: schmitz-and-motani-2011
name: Schmitz and Motani, 2011
contentURL: https://opendata.eol.org/dataset/3726d1b8-291e-412b-861c-41988a448607/resource/161d3680-8faf-403f-acc2-d3d225798046/download/schmitz.zip
datasetDOI_URL: https://opendata.eol.org/dataset/schmitz-and-motani-2011
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Archosauria
eventDate:
paperDOIcitation: https://doi.org/10.1126/science.1200043
description: Schmitz L, Motani R. 2011 Nocturnality in dinosaurs inferred from scleral ring and orbit morphology. Science 332, 705,Aei708. (doi: 10.1126/science.1200043)
taxalist: 
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
layout: dataset
id: le-duc-et-al-2015
name: Le Duc et al, 2015
contentURL: https://opendata.eol.org/dataset/2285692d-f8ea-45b5-a92a-0d14af030270/resource/ce0b9075-8856-4757-998d-81ac6e842703/download/leduc.zip
datasetDOI_URL: https://opendata.eol.org/dataset/le-duc-et-al-2015
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Palaeognathae
eventDate:
paperDOIcitation: https://doi.org/10.1186/s13059-015-0711-4
description: Le Duc, D., Renaud, G., Krishnan, A. et al. Kiwi genome provides insights into evolution of a nocturnal lifestyle. Genome Biol 16, 147 (2015). https://doi.org/10.1186/s13059-015-0711-4
taxaList: Apteryx|Ratites
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---

Editors @open-traits-network/editors: please see https://github.com/open-traits-network/open-traits-network.github.io/tree/master/_datasets#readme for information on registration process.

jhpoelen commented 1 year ago

very impressive! Thanks for sharing.

Any chance you can provide the many entries in separate files named:

[dataset-id].md

so

le-duc-et-al-2015.md

would contain:

---
layout: dataset
id: le-duc-et-al-2015
name: Le Duc et al, 2015
contentURL: https://opendata.eol.org/dataset/2285692d-f8ea-45b5-a92a-0d14af030270/resource/ce0b9075-8856-4757-998d-81ac6e842703/download/leduc.zip
datasetDOI_URL: https://opendata.eol.org/dataset/le-duc-et-al-2015
contactName: Jen Hammock
contactEmail: secretariat@eol.org
license: CC0
traitList: behavioral circadian rhythm
higherGeography:
decimalLatitude:
decimalLongitude:
taxon: Palaeognathae
eventDate:
paperDOIcitation: https://doi.org/10.1186/s13059-015-0711-4
description: Le Duc, D., Renaud, G., Krishnan, A. et al. Kiwi genome provides insights into evolution of a nocturnal lifestyle. Genome Biol 16, 147 (2015). https://doi.org/10.1186/s13059-015-0711-4
taxaList: Apteryx|Ratites
usefulClasses:
dataStandard:
standardizationScripts:
webpage:
---
jhammock commented 1 year ago

So, a separate issue for each source?

jhpoelen commented 1 year ago

In these batch situations, I was hoping to get a single zip file with one md file per dataset as described above.

If this is too much trouble, I'd probably end up writing a little script that does it.

Just let me know what works best for you.

jhammock commented 1 year ago

Sure, download link: https://opendata.eol.org/dataset/resource-metadata-sample/resource/9093831b-fc2e-437b-aa59-65653e2b8f6e

jhpoelen commented 1 year ago

Please review the datasets you've added via: https://opentraits.org/datasets . Holler if there's anything missing or needs updating! Thanks for sharing this massive amount of trait datasets.

jhammock commented 1 year ago

A sample of the records suggests they are all as I expected. I will re-open this if I find any in need of help. This does rather fill the registry with "sillier" datasets than those that went before, doesn't it? That's the trouble with taxonomically inferable data.

jhpoelen commented 1 year ago

Good to hear that at a first glance, the registration went ok.

Could you give an example of a sillier dataset? Not quite sure what you mean.

jhammock commented 1 year ago

Oh, it's only that many of these datasets only contain one or two records, eg: https://opentraits.org/datasets/alava-and-aguirre-2005 asserts one thing: that Acanthocephala are vermiform. It's not even the main thrust of the reference, but it was a fairly contemporary, accessible source, so that's what we're using. And it's darn useful on EOL, if you want to search for the worm-shaped parasites of North America or whatever, but on its own it hardly warrants the description "dataset".

jhpoelen commented 1 year ago

Ah ok, I can see your point. I wouldn't say a small and important dataset is silly. I'd say its useful, even if it contains one row.

jhpoelen commented 1 year ago

PS I very much like searching for worm-shaped parasites of North America. :smile:

jhammock commented 1 year ago

Nano-publications, here we come!

jhpoelen commented 1 year ago

OTN: nanopubs, megapubs and everything in-between.