Problematic BIDS examples

openMetadataInitiative / bids2openminds

A tool to generate openMINDS metadata from BIDS datasets

MIT License

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Problematic BIDS examples #21

Open spieschnik opened 5 months ago

spieschnik commented 5 months ago

An issue to report all problematic BIDS examples and their errors

spieschnik commented 5 months ago

Error for ds000247:

ds000247

spieschnik commented 5 months ago

Error for eeg_cbm: eeg_cbm

spieschnik commented 5 months ago

Error for asl001:

asl001

Peyman-N commented 5 months ago

Hi @spieschnik, could you please rerun these with the latest version? I did it on my machine, and they ran, but there still could be a problem, especially the last one, which might only occur on your PC.

spieschnik commented 5 months ago

Still the same errors when using the newest version (bids2poenminds-number_of_files), the file count works!

eeg_cbm

asl001

apdavison commented 5 months ago

I've added these problematic examples to the test suite, which now runs on Windows, Linux and Mac OS, and all tests pass with the latest "main" branch.

In general, when you find other examples that produce errors, please add then to the list "example_dataset_labels" in the test_bids_examples.py file.

lzehl commented 5 months ago

@Peyman-N or @spieschnik you can add "ds000001-fmriprep" from the previous issue #18 to the example_dataset_labels in the test_bids_examples.py