add report of converter as output - Githubissues

openMetadataInitiative / bids2openminds

A tool to generate openMINDS metadata from BIDS datasets

MIT License

1 stars 3 forks source link

add report of converter as output #47

Closed lzehl closed 2 months ago

lzehl commented 3 months ago

output should be printed out as default, with a option to set to quite

output can then be transferred to file by the user

potential structure: SUMMARY: conversion completed collection was saved to XXX

CONVERTED FOLLOWING ELEMENTS:

dataset title
dataset version
dataset authors
number of subjects
number of files
number of file bundles

DOUBLE CHECK:

subject states
author names

NOT CONVERTED:

derivative data (missing clear BIDS specifications)
in-depth metadata (not implemented yet)

lzehl commented 2 months ago

For states:

There are as many subject states as sessions for each subject. Please modify to your needs (divide into more or merge into less subject states).

lzehl commented 2 months ago

For authors:

The conversion of authors is not reliable due to missing source convention. The converter may fail in detecting family vs given name. The converter will fail in detecting organizations. The following persons (family name, given name) were converted:

family name, given name (dynamic)

lzehl commented 2 months ago

For behavioral protocols

The conversion of behavioral protocols is incomplete. Only the task-label is extracted as name and internal identifier of a behavioral protocol. Please adjust to your needs.