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A toolkit for developing and comparing reinforcement learning algorithms.
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Installing doom fails on Ubuntu 16.04 #154

Closed sparseinference closed 8 years ago

sparseinference commented 8 years ago

I'm having some trouble with the installation of the Doom environment: I'm pretty sure I've got all the dependencies installed but there still seems to be some kind of conflict:

pip install -e '.[doom]'

eventually reports:

[ 37%] Linking CXX executable ../../../bin/vizdoom
    CMakeFiles/vizdoom.dir/tempfiles.cpp.o: In function `FTempFileName::FTempFileName(char const*)':
    tempfiles.cpp:(.text+0x7): warning: the use of `tempnam' is dangerous, better use `mkstemp'
    //lib/x86_64-linux-gnu/libsystemd.so.0: undefined reference to `lzma_stream_decoder@XZ_5.0'
    //lib/x86_64-linux-gnu/libsystemd.so.0: undefined reference to `lzma_end@XZ_5.0'
    //lib/x86_64-linux-gnu/libsystemd.so.0: undefined reference to `lzma_code@XZ_5.0'
    collect2: error: ld returned 1 exit status
    src/vizdoom/src/CMakeFiles/vizdoom.dir/build.make:8868: recipe for target 'bin/vizdoom' failed
    make[2]: *** [bin/vizdoom] Error 1
    CMakeFiles/Makefile2:957: recipe for target 'src/vizdoom/src/CMakeFiles/vizdoom.dir/all' failed

I've seen this error reported elsewhere on the interwebs for different reasons but I still can't see what's wrong.

Any ideas?

jietang commented 8 years ago

Thanks. Can you report the full output of pip install?

Can you also try running file /lib/x86_64-linux-gnu/libsystemd.so.0 and report the results?

sparseinference commented 8 years ago

Yes!

file /lib/x86_64-linux-gnu/libsystemd.so.0 returns: /lib/x86_64-linux-gnu/libsystemd.so.0: symbolic link to libsystemd.so.0.14.0 which I think is the correct Xenial version.

Here is the full output of pip install:

Obtaining file:///home/peter/src/PongFromPixels/code/gym
Requirement already satisfied (use --upgrade to upgrade): numpy>=1.10.4 in /home/peter/anaconda3/lib/python3.5/site-packages (from gym==0.1.3)
Requirement already satisfied (use --upgrade to upgrade): requests>=2.0 in /home/peter/anaconda3/lib/python3.5/site-packages (from gym==0.1.3)
Requirement already satisfied (use --upgrade to upgrade): six in /home/peter/anaconda3/lib/python3.5/site-packages (from gym==0.1.3)
Requirement already satisfied (use --upgrade to upgrade): pyglet in /home/peter/anaconda3/lib/python3.5/site-packages (from gym==0.1.3)
Collecting doom_py>=0.0.11 (from gym==0.1.3)
  Using cached doom-py-0.0.12.tar.gz
Building wheels for collected packages: doom-py
  Running setup.py bdist_wheel for doom-py ... error
  Complete output from command /home/peter/anaconda3/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-e2_wc6sm/doom-py/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" bdist_wheel -d /tmp/tmpj0ndqss9pip-wheel- --python-tag cp35:
  running bdist_wheel
  running build
  -- The C compiler identification is GNU 5.3.1
  -- The CXX compiler identification is GNU 5.3.1
  -- Check for working C compiler: /usr/bin/cc
  -- Check for working C compiler: /usr/bin/cc -- works
  -- Detecting C compiler ABI info
  -- Detecting C compiler ABI info - done
  -- Detecting C compile features
  -- Detecting C compile features - done
  -- Check for working CXX compiler: /usr/bin/c++
  -- Check for working CXX compiler: /usr/bin/c++ -- works
  -- Detecting CXX compiler ABI info
  -- Detecting CXX compiler ABI info - done
  -- Detecting CXX compile features
  -- Detecting CXX compile features - done
  -- Looking for pthread.h
  -- Looking for pthread.h - found
  -- Looking for pthread_create
  -- Looking for pthread_create - not found
  -- Looking for pthread_create in pthreads
  -- Looking for pthread_create in pthreads - not found
  -- Looking for pthread_create in pthread
  -- Looking for pthread_create in pthread - found
  -- Found Threads: TRUE
  -- Boost version: 1.58.0
  -- Found the following Boost libraries:
  --   filesystem
  --   thread
  --   system
  --   date_time
  --   chrono
  --   regex
  --   iostreams
  --   atomic
  -- Could NOT find BZip2 (missing:  BZIP2_LIBRARIES BZIP2_INCLUDE_DIR)
  -- Found JPEG: /home/peter/anaconda3/lib/libjpeg.so
  -- Found ZLIB: /home/peter/anaconda3/lib/libz.so (found version "1.2.8")
  -- Could NOT find GME (missing:  GME_LIBRARIES GME_INCLUDE_DIR)
  -- Using system zlib
  -- Using system jpeg library
  -- Using internal bzip2 library
  -- Using internal gme library
  -- Performing Test HAVE_NO_ARRAY_BOUNDS
  -- Performing Test HAVE_NO_ARRAY_BOUNDS - Success
  -- Performing Test __LIBGME_TEST_VISIBILITY
  -- Performing Test __LIBGME_TEST_VISIBILITY - Success
  -- Looking for strdup
  -- Looking for strdup - found
  -- Looking for strndup
  -- Looking for strndup - found
  -- Looking for sys/types.h
  -- Looking for sys/types.h - found
  -- Looking for stdint.h
  -- Looking for stdint.h - found
  -- Looking for stddef.h
  -- Looking for stddef.h - found
  -- Check size of char
  -- Check size of char - done
  -- Check size of short
  -- Check size of short - done
  -- Check size of int
  -- Check size of int - done
  -- Check size of long
  -- Check size of long - done
  -- /home/peter/anaconda3/include
  -- /tmp/pip-build-e2_wc6sm/doom-py/doom_py/src/vizdoom/bzip2
  -- /tmp/pip-build-e2_wc6sm/doom-py/doom_py/src/vizdoom/lzma/C
  -- Looking for itoa
  -- Looking for itoa - not found
  -- Performing Test DUMB_CAN_USE_SSE
  -- Performing Test DUMB_CAN_USE_SSE - Success
  -- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.1")
  -- Checking for module 'gtk+-2.0'
  --   Found gtk+-2.0, version 2.24.30
  -- Found SDL2: /usr/lib/x86_64-linux-gnu/libSDL2main.a;/usr/lib/x86_64-linux-gnu/libSDL2.so;-lpthread
  -- Could NOT find OpenAL (missing:  OPENAL_LIBRARY OPENAL_INCLUDE_DIR)
  -- Could not find FMOD include files
  -- Could NOT find FluidSynth (missing:  FLUIDSYNTH_LIBRARIES FLUIDSYNTH_INCLUDE_DIR)
  -- Selected assembler: /usr/bin/as
  -- Looking for filelength
  -- Looking for filelength - not found
  -- Looking for strupr
  -- Looking for strupr - not found
  -- Looking for stricmp
  -- Looking for stricmp - not found
  -- Looking for strnicmp
  -- Looking for strnicmp - not found
  -- Looking for clock_gettime in rt
  -- Looking for clock_gettime in rt - found
  -- Performing Test HAS_VA_COPY
  -- Performing Test HAS_VA_COPY - Success
  -- Boost version: 1.58.0
  -- Found the following Boost libraries:
  --   thread
  --   system
  --   date_time
  --   chrono
  --   atomic
  -- Fluid synth libs: FLUIDSYNTH_LIBRARIES-NOTFOUND
  -- Found PythonInterp: /home/peter/anaconda3/bin/python (found suitable version "3.5.1", minimum required is "2.7")
  -- Found PythonLibs: /home/peter/anaconda3/lib/libpython3.5m.so (found suitable version "3.5.1", minimum required is "3.5")
  -- Could NOT find Boost
  -- Boost version: 1.58.0
  -- Found the following Boost libraries:
  --   python-py35
  -- Found NUMPY: /home/peter/anaconda3/lib/python3.5/site-packages/numpy/core/include
  -- Found components for NumPy
  -- NUMPY_ROOT_DIR    = /usr/local
  -- NUMPY_INCLUDES    = /home/peter/anaconda3/lib/python3.5/site-packages/numpy/core/include
  -- NUMPY_LIBRARIES   =
  -- NUMPY_API_VERSION = 1.10.4
  -- Configuring done
  -- Generating done
  -- Build files have been written to: /tmp/pip-build-e2_wc6sm/doom-py/doom_py
  Scanning dependencies of target libvizdoom_static
  Scanning dependencies of target libvizdoom_shared
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  --2016-06-02 16:42:20--  https://github.com/freedoom/freedoom/releases/download/v0.10.1/freedoom-0.10.1.zip
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   void* default_bzalloc ( void* opaque, Int32 items, Int32 size )
                                 ^
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   void default_bzfree ( void* opaque, void* addr )
                               ^
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           SetUi32(p->temp, val);
           ^
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                  for (t = 0; t < nGroups; t++) cost[t] += s->len[t][icv];
                                                        ^
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             ^
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               if (cost[t] < bc) { bc = cost[t]; bt = t; };
                           ^
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             ^
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                           ^
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  /tmp/pip-build-e2_wc6sm/doom-py/doom_py/src/vizdoom/src/r_data/sprites.cpp: In function ‘void R_InitSpriteDefs()’:
  /tmp/pip-build-e2_wc6sm/doom-py/doom_py/src/vizdoom/src/r_data/sprites.cpp:317:15: warning: array subscript is above array bounds [-Warray-bounds]
       if (name[j] >= '0' && name[j] <= '9')
                 ^
  /tmp/pip-build-e2_wc6sm/doom-py/doom_py/src/vizdoom/src/r_data/sprites.cpp:317:15: warning: array subscript is above array bounds [-Warray-bounds]
  /tmp/pip-build-e2_wc6sm/doom-py/doom_py/src/vizdoom/src/r_data/sprites.cpp:317:15: warning: array subscript is above array bounds [-Warray-bounds]
  /tmp/pip-build-e2_wc6sm/doom-py/doom_py/src/vizdoom/src/r_data/sprites.cpp:317:15: warning: array subscript is above array bounds [-Warray-bounds]
  /tmp/pip-build-e2_wc6sm/doom-py/doom_py/src/vizdoom/src/r_data/sprites.cpp:317:15: warning: array subscript is above array bounds [-Warray-bounds]
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  /tmp/pip-build-e2_wc6sm/doom-py/doom_py/src/vizdoom/src/vizdoom_input.cpp: In function ‘void ViZDoom_InputTic()’:
  /tmp/pip-build-e2_wc6sm/doom-py/doom_py/src/vizdoom/src/vizdoom_input.cpp:342:31: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
       else if(vizdoomLastUpdate == VIZDOOM_TIME){
                                 ^
  [100%] Linking CXX executable ../../../bin/vizdoom
  CMakeFiles/vizdoom.dir/tempfiles.cpp.o: In function `FTempFileName::FTempFileName(char const*)':
  tempfiles.cpp:(.text+0x7): warning: the use of `tempnam' is dangerous, better use `mkstemp'
  //lib/x86_64-linux-gnu/libsystemd.so.0: undefined reference to `lzma_stream_decoder@XZ_5.0'
  //lib/x86_64-linux-gnu/libsystemd.so.0: undefined reference to `lzma_end@XZ_5.0'
  //lib/x86_64-linux-gnu/libsystemd.so.0: undefined reference to `lzma_code@XZ_5.0'
  collect2: error: ld returned 1 exit status
  src/vizdoom/src/CMakeFiles/vizdoom.dir/build.make:8868: recipe for target 'bin/vizdoom' failed
  make[2]: *** [bin/vizdoom] Error 1
  CMakeFiles/Makefile2:957: recipe for target 'src/vizdoom/src/CMakeFiles/vizdoom.dir/all' failed
  make[1]: *** [src/vizdoom/src/CMakeFiles/vizdoom.dir/all] Error 2
  Makefile:83: recipe for target 'all' failed
  make: *** [all] Error 2

  Could not build doom-py: Command '['make', '-j', '11']' returned non-zero exit status 2. (HINT: are you sure cmake is installed? You might also be missing a library. Try running 'apt-get install -y python-numpy cmake zlib1g-dev libjpeg-dev libboost-all-dev gcc libsdl2-dev wget unzip'

  Traceback (most recent call last):
    File "<string>", line 1, in <module>
    File "/tmp/pip-build-e2_wc6sm/doom-py/setup.py", line 82, in <module>
      include_package_data=True,
    File "/home/peter/anaconda3/lib/python3.5/distutils/core.py", line 148, in setup
      dist.run_commands()
    File "/home/peter/anaconda3/lib/python3.5/distutils/dist.py", line 955, in run_commands
      self.run_command(cmd)
    File "/home/peter/anaconda3/lib/python3.5/distutils/dist.py", line 974, in run_command
      cmd_obj.run()
    File "/home/peter/anaconda3/lib/python3.5/site-packages/wheel/bdist_wheel.py", line 179, in run
      self.run_command('build')
    File "/home/peter/anaconda3/lib/python3.5/distutils/cmd.py", line 313, in run_command
      self.distribution.run_command(command)
    File "/home/peter/anaconda3/lib/python3.5/distutils/dist.py", line 974, in run_command
      cmd_obj.run()
    File "/tmp/pip-build-e2_wc6sm/doom-py/setup.py", line 57, in run
      build_func()
    File "/tmp/pip-build-e2_wc6sm/doom-py/setup.py", line 37, in build_linux
      build_common('so')
    File "/tmp/pip-build-e2_wc6sm/doom-py/setup.py", line 25, in build_common
      subprocess.check_call(['make', '-j', str(cores_to_use)], cwd='doom_py')
    File "/home/peter/anaconda3/lib/python3.5/subprocess.py", line 584, in check_call
      raise CalledProcessError(retcode, cmd)
  subprocess.CalledProcessError: Command '['make', '-j', '11']' returned non-zero exit status 2

  ----------------------------------------
  Failed building wheel for doom-py
  Running setup.py clean for doom-py
Failed to build doom-py
Installing collected packages: doom-py, gym
  Running setup.py install for doom-py ... error
    Complete output from command /home/peter/anaconda3/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-e2_wc6sm/doom-py/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-0ti8u9xi-record/install-record.txt --single-version-externally-managed --compile:
    running install
    running build
    -- Boost version: 1.58.0
    -- Found the following Boost libraries:
    --   filesystem
    --   thread
    --   system
    --   date_time
    --   chrono
    --   regex
    --   iostreams
    --   atomic
    -- Could NOT find BZip2 (missing:  BZIP2_LIBRARIES BZIP2_INCLUDE_DIR)
    -- Could NOT find GME (missing:  GME_LIBRARIES GME_INCLUDE_DIR)
    -- Using system zlib
    -- Using system jpeg library
    -- Using internal bzip2 library
    -- Using internal gme library
    -- /home/peter/anaconda3/include
    -- /tmp/pip-build-e2_wc6sm/doom-py/doom_py/src/vizdoom/bzip2
    -- /tmp/pip-build-e2_wc6sm/doom-py/doom_py/src/vizdoom/lzma/C
    -- Could NOT find OpenAL (missing:  OPENAL_LIBRARY OPENAL_INCLUDE_DIR)
    -- Could not find FMOD include files
    -- Could NOT find FluidSynth (missing:  FLUIDSYNTH_LIBRARIES FLUIDSYNTH_INCLUDE_DIR)
    -- Selected assembler: /usr/bin/as
    -- Boost version: 1.58.0
    -- Found the following Boost libraries:
    --   thread
    --   system
    --   date_time
    --   chrono
    --   atomic
    -- Fluid synth libs: FLUIDSYNTH_LIBRARIES-NOTFOUND
    -- Could NOT find Boost
    -- Boost version: 1.58.0
    -- Found the following Boost libraries:
    --   python-py35
    -- Found components for NumPy
    -- NUMPY_ROOT_DIR    = /usr/local
    -- NUMPY_INCLUDES    = /home/peter/anaconda3/lib/python3.5/site-packages/numpy/core/include
    -- NUMPY_LIBRARIES   =
    -- NUMPY_API_VERSION = 1.10.4
    -- Configuring done
    -- Generating done
    -- Build files have been written to: /tmp/pip-build-e2_wc6sm/doom-py/doom_py
    [  0%] Built target arithchk
    [  3%] Built target lzma
    [  3%] Built target lemon
    [ 19%] Built target dumb
    [ 20%] Built target libvizdoom_static
    [ 21%] Built target bz2
    [ 22%] Built target qnan
    [ 31%] Built target gme
    [ 31%] Built target freedoom2
    [ 31%] Built target updaterevision
    [ 33%] Built target re2c
    [ 34%] Built target libvizdoom_shared
    [ 35%] Built target gdtoa
    [ 36%] Built target libvizdoom_python
    [ 37%] Built target zipdir
    [ 37%] Linking CXX executable ../../../bin/vizdoom
    CMakeFiles/vizdoom.dir/tempfiles.cpp.o: In function `FTempFileName::FTempFileName(char const*)':
    tempfiles.cpp:(.text+0x7): warning: the use of `tempnam' is dangerous, better use `mkstemp'
    //lib/x86_64-linux-gnu/libsystemd.so.0: undefined reference to `lzma_stream_decoder@XZ_5.0'
    //lib/x86_64-linux-gnu/libsystemd.so.0: undefined reference to `lzma_end@XZ_5.0'
    //lib/x86_64-linux-gnu/libsystemd.so.0: undefined reference to `lzma_code@XZ_5.0'
    collect2: error: ld returned 1 exit status
    src/vizdoom/src/CMakeFiles/vizdoom.dir/build.make:8868: recipe for target 'bin/vizdoom' failed
    make[2]: *** [bin/vizdoom] Error 1
    CMakeFiles/Makefile2:957: recipe for target 'src/vizdoom/src/CMakeFiles/vizdoom.dir/all' failed
    make[1]: *** [src/vizdoom/src/CMakeFiles/vizdoom.dir/all] Error 2
    Makefile:83: recipe for target 'all' failed
    make: *** [all] Error 2

    Could not build doom-py: Command '['make', '-j', '11']' returned non-zero exit status 2. (HINT: are you sure cmake is installed? You might also be missing a library. Try running 'apt-get install -y python-numpy cmake zlib1g-dev libjpeg-dev libboost-all-dev gcc libsdl2-dev wget unzip'

    Traceback (most recent call last):
      File "<string>", line 1, in <module>
      File "/tmp/pip-build-e2_wc6sm/doom-py/setup.py", line 82, in <module>
        include_package_data=True,
      File "/home/peter/anaconda3/lib/python3.5/distutils/core.py", line 148, in setup
        dist.run_commands()
      File "/home/peter/anaconda3/lib/python3.5/distutils/dist.py", line 955, in run_commands
        self.run_command(cmd)
      File "/home/peter/anaconda3/lib/python3.5/distutils/dist.py", line 974, in run_command
        cmd_obj.run()
      File "/home/peter/anaconda3/lib/python3.5/site-packages/setuptools-21.2.1-py3.5.egg/setuptools/command/install.py", line 61, in run
      File "/home/peter/anaconda3/lib/python3.5/distutils/command/install.py", line 539, in run
        self.run_command('build')
      File "/home/peter/anaconda3/lib/python3.5/distutils/cmd.py", line 313, in run_command
        self.distribution.run_command(command)
      File "/home/peter/anaconda3/lib/python3.5/distutils/dist.py", line 974, in run_command
        cmd_obj.run()
      File "/tmp/pip-build-e2_wc6sm/doom-py/setup.py", line 57, in run
        build_func()
      File "/tmp/pip-build-e2_wc6sm/doom-py/setup.py", line 37, in build_linux
        build_common('so')
      File "/tmp/pip-build-e2_wc6sm/doom-py/setup.py", line 25, in build_common
        subprocess.check_call(['make', '-j', str(cores_to_use)], cwd='doom_py')
      File "/home/peter/anaconda3/lib/python3.5/subprocess.py", line 584, in check_call
        raise CalledProcessError(retcode, cmd)
    subprocess.CalledProcessError: Command '['make', '-j', '11']' returned non-zero exit status 2

    ----------------------------------------
Command "/home/peter/anaconda3/bin/python -u -c "import setuptools, tokenize;__file__='/tmp/pip-build-e2_wc6sm/doom-py/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-0ti8u9xi-record/install-record.txt --single-version-externally-managed --compile" failed with error code 1 in /tmp/pip-build-e2_wc6sm/doom-py/
jietang commented 8 years ago

Can you run

env | grep _PATH

and report the output?

Also, for debugging purposes you might want to clone github.com/openai/doom-py and run python setup.py bdist_wheel manually (produces the same output but will cache intermediate build artifacts)

sparseinference commented 8 years ago

ok:

env | grep _PATH returns:

XDG_SEAT_PATH=/org/freedesktop/DisplayManager/Seat0
DEFAULTS_PATH=/usr/share/gconf//usr/share/xsessions/plasma.default.path
MANDATORY_PATH=/usr/share/gconf//usr/share/xsessions/plasma.mandatory.path
XDG_SESSION_PATH=/org/freedesktop/DisplayManager/Session1

I cloned and built the doom-py repo, with the same result.

It looks like only libvizdoom.a and libvizdoom.so in the bin directory were built correctly, and vizdoom.so in the python subdirectory of that.

ppaquette commented 8 years ago

Can you double check that all the dependencies for both doom-py and gym have been installed to their latest versions:

sudo apt-get install -y python-numpy python-dev cmake zlib1g-dev libjpeg-dev xvfb libav-tools xorg-dev python-opengl libboost-all-dev libsdl2-dev swig
sudo apt-get install -y python-numpy cmake zlib1g-dev libjpeg-dev libboost-all-dev gcc libsdl2-dev wget unzip
sparseinference commented 8 years ago

I found the problem. I had a bad path to cmake in my PATH variable:

cmake-3.5.1-Linux-x86_64//bin

I realized something must be wrong with the path after I removed everything from the path except the essential system directories. I then installed pip3 and did a fresh install of the gym, which succeeded.

Then to make sure that it wasn't something to do with Anaconda, I removed doom-py and reinstalled it.

Sorry about the false alarm.

jietang commented 8 years ago

Glad you got to the root of it.