mnazarov
commented
5 years ago The error says "No command specified", so please make sure you have CMD in the docker file, or 'container-command' in the application.yml
Closed borhenryk closed 5 years ago
mnazarov
commented
5 years ago The error says "No command specified", so please make sure you have CMD in the docker file, or 'container-command' in the application.yml
borhenryk
commented
5 years ago Dockerfile: FROM openanalytics/r-base
MAINTAINER Tobias Verbeke "tobias.verbeke@openanalytics.eu"
RUN apt-get update && apt-get install -y \ sudo \ pandoc \ pandoc-citeproc \ libcurl4-gnutls-dev \ libcairo2-dev \ libxt-dev \ libssl-dev \ libssh2-1-dev \ libssl1.0.0
RUN apt-get update && apt-get install -y \ libmpfr-dev
RUN R -e "install.packages(c('shiny', 'rmarkdown'), repos='https://cloud.r-project.org/')"
RUN R -e "install.packages('Rmpfr', repos='https://cloud.r-project.org/')"
RUN mkdir /root/euler COPY euler /root/euler
COPY Rprofile.site /usr/lib/R/etc/
EXPOSE 3838
CMD ["R", "-e", "shiny::runApp('/root/euler')"]
application.yml:
logging: file: shinyproxy.log
So I think it is correct like this?
mnazarov
commented
5 years ago The error is because you have used docker-cmd and docker-image instead of container-cmd and container-image in the configuration file. Please see example at https://www.shinyproxy.io/deploying-apps/#configure-shinyproxy
Hi! I have followed the official ShinyProxy tutorial. Hello-Word and tabset_06 is working file but when trying to open the Euler App I get the following error (I use Linux (ubuntu 16.04) VM from Azure):
Error Status code: 500
Message: Failed to start container
Stack Trace: eu.openanalytics.containerproxy.ContainerProxyException: Failed to start container at eu.openanalytics.containerproxy.backend.AbstractContainerBackend.startProxy(AbstractContainerBackend.java:113) at eu.openanalytics.containerproxy.service.ProxyService.startProxy(ProxyService.java:213) at eu.openanalytics.shinyproxy.controllers.AppController.getOrStart(AppController.java:109) at eu.openanalytics.shinyproxy.controllers.AppController.startApp(AppController.java:68) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.springframework.web.method.support.InvocableHandlerMethod.doInvoke(InvocableHandlerMethod.java:209) at org.springframework.web.method.support.InvocableHandlerMethod.invokeForRequest(InvocableHandlerMethod.java:136) at org.springframework.web.servlet.mvc.method.annotation.ServletInvocableHandlerMethod.invokeAndHandle(ServletInvocableHandlerMethod.java:102) at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.invokeHandlerMethod(RequestMappingHandlerAdapter.java:870) at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.handleInternal(RequestMappingHandlerAdapter.java:776) at org.springframework.web.servlet.mvc.method.AbstractHandlerMethodAdapter.handle(AbstractHandlerMethodAdapter.java:87) at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:991) at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:925) at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:978) at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:881) at javax.servlet.http.HttpServlet.service(HttpServlet.java:707) at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:855) at javax.servlet.http.HttpServlet.service(HttpServlet.java:790) at io.undertow.servlet.handlers.ServletHandler.handleRequest(ServletHandler.java:74) at io.undertow.servlet.handlers.FilterHandler$FilterChainImpl.doFilter(FilterHandler.java:129) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:320) at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:127) at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:91) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334) at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:119) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334) at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:137) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334) at org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:111) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334) at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:170) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334) at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:63) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334) at org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilterInternal(BasicAuthenticationFilter.java:158) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334) at org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:200) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334) at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:116) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334) at org.springframework.security.web.header.HeaderWriterFilter.doFilterInternal(HeaderWriterFilter.java:66) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334) at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:105) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334) at org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:56) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107) at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334) at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:215) at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:178) at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:357) at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:270) at io.undertow.servlet.core.ManagedFilter.doFilter(ManagedFilter.java:61) at io.undertow.servlet.handlers.FilterHandler$FilterChainImpl.doFilter(FilterHandler.java:131) at org.springframework.web.filter.RequestContextFilter.doFilterInternal(RequestContextFilter.java:99) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107) at io.undertow.servlet.core.ManagedFilter.doFilter(ManagedFilter.java:61) at io.undertow.servlet.handlers.FilterHandler$FilterChainImpl.doFilter(FilterHandler.java:131) at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:200) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107) at io.undertow.servlet.core.ManagedFilter.doFilter(ManagedFilter.java:61) at io.undertow.servlet.handlers.FilterHandler$FilterChainImpl.doFilter(FilterHandler.java:131) at io.undertow.servlet.handlers.FilterHandler.handleRequest(FilterHandler.java:84) at io.undertow.servlet.handlers.security.ServletSecurityRoleHandler.handleRequest(ServletSecurityRoleHandler.java:62) at io.undertow.servlet.handlers.ServletChain$1.handleRequest(ServletChain.java:64) at io.undertow.servlet.handlers.ServletDispatchingHandler.handleRequest(ServletDispatchingHandler.java:36) at io.undertow.server.handlers.PathHandler.handleRequest(PathHandler.java:94) at eu.openanalytics.containerproxy.util.ProxyMappingManager$ProxyPathHandler.handleRequest(ProxyMappingManager.java:159) at io.undertow.servlet.handlers.security.SSLInformationAssociationHandler.handleRequest(SSLInformationAssociationHandler.java:131) at io.undertow.servlet.handlers.security.ServletAuthenticationCallHandler.handleRequest(ServletAuthenticationCallHandler.java:57) at io.undertow.server.handlers.PredicateHandler.handleRequest(PredicateHandler.java:43) at io.undertow.security.handlers.AbstractConfidentialityHandler.handleRequest(AbstractConfidentialityHandler.java:46) at io.undertow.servlet.handlers.security.ServletConfidentialityConstraintHandler.handleRequest(ServletConfidentialityConstraintHandler.java:64) at io.undertow.security.handlers.AuthenticationMechanismsHandler.handleRequest(AuthenticationMechanismsHandler.java:60) at io.undertow.servlet.handlers.security.CachedAuthenticatedSessionHandler.handleRequest(CachedAuthenticatedSessionHandler.java:77) at io.undertow.security.handlers.AbstractSecurityContextAssociationHandler.handleRequest(AbstractSecurityContextAssociationHandler.java:43) at io.undertow.server.handlers.PredicateHandler.handleRequest(PredicateHandler.java:43) at io.undertow.server.handlers.PredicateHandler.handleRequest(PredicateHandler.java:43) at io.undertow.servlet.handlers.ServletInitialHandler.handleFirstRequest(ServletInitialHandler.java:292) at io.undertow.servlet.handlers.ServletInitialHandler.access$100(ServletInitialHandler.java:81) at io.undertow.servlet.handlers.ServletInitialHandler$2.call(ServletInitialHandler.java:138) at io.undertow.servlet.handlers.ServletInitialHandler$2.call(ServletInitialHandler.java:135) at io.undertow.servlet.core.ServletRequestContextThreadSetupAction$1.call(ServletRequestContextThreadSetupAction.java:48) at io.undertow.servlet.core.ContextClassLoaderSetupAction$1.call(ContextClassLoaderSetupAction.java:43) at io.undertow.servlet.handlers.ServletInitialHandler.dispatchRequest(ServletInitialHandler.java:272) at io.undertow.servlet.handlers.ServletInitialHandler.access$000(ServletInitialHandler.java:81) at io.undertow.servlet.handlers.ServletInitialHandler$1.handleRequest(ServletInitialHandler.java:104) at io.undertow.server.Connectors.executeRootHandler(Connectors.java:336) at io.undertow.server.HttpServerExchange$1.run(HttpServerExchange.java:830) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) at java.lang.Thread.run(Thread.java:748) Caused by: com.spotify.docker.client.exceptions.DockerRequestException: Request error: POST http://localhost:2375/containers/create: 400, body: {"message":"No command specified"}
at com.spotify.docker.client.DefaultDockerClient.propagate(DefaultDockerClient.java:2838) at com.spotify.docker.client.DefaultDockerClient.request(DefaultDockerClient.java:2721) at com.spotify.docker.client.DefaultDockerClient.createContainer(DefaultDockerClient.java:740) at com.spotify.docker.client.DefaultDockerClient.createContainer(DefaultDockerClient.java:722) at eu.openanalytics.containerproxy.backend.docker.DockerEngineBackend.startContainer(DockerEngineBackend.java:83) at eu.openanalytics.containerproxy.backend.AbstractContainerBackend.doStartProxy(AbstractContainerBackend.java:129) at eu.openanalytics.containerproxy.backend.AbstractContainerBackend.startProxy(AbstractContainerBackend.java:110) ... 95 more Caused by: javax.ws.rs.BadRequestException: HTTP 400 Bad Request at org.glassfish.jersey.client.JerseyInvocation.convertToException(JerseyInvocation.java:1077) at org.glassfish.jersey.client.JerseyInvocation.translate(JerseyInvocation.java:883) at org.glassfish.jersey.client.JerseyInvocation.access$500(JerseyInvocation.java:99) at org.glassfish.jersey.client.JerseyInvocation$2.completed(JerseyInvocation.java:840) at org.glassfish.jersey.client.ClientRuntime.processResponse(ClientRuntime.java:227) at org.glassfish.jersey.client.ClientRuntime.access$200(ClientRuntime.java:85) at org.glassfish.jersey.client.ClientRuntime$2.lambda$response$0(ClientRuntime.java:178) at org.glassfish.jersey.internal.Errors$1.call(Errors.java:272) at org.glassfish.jersey.internal.Errors$1.call(Errors.java:268) at org.glassfish.jersey.internal.Errors.process(Errors.java:316) at org.glassfish.jersey.internal.Errors.process(Errors.java:298) at org.glassfish.jersey.internal.Errors.process(Errors.java:268) at org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:312) at org.glassfish.jersey.client.ClientRuntime$2.response(ClientRuntime.java:178) at org.glassfish.jersey.apache.connector.ApacheConnector$1.run(ApacheConnector.java:491) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at jersey.repackaged.com.google.common.util.concurrent.MoreExecutors$DirectExecutorService.execute(MoreExecutors.java:299) at java.util.concurrent.AbstractExecutorService.submit(AbstractExecutorService.java:112) at jersey.repackaged.com.google.common.util.concurrent.AbstractListeningExecutorService.submit(AbstractListeningExecutorService.java:50) at jersey.repackaged.com.google.common.util.concurrent.AbstractListeningExecutorService.submit(AbstractListeningExecutorService.java:37) at org.glassfish.jersey.apache.connector.ApacheConnector.apply(ApacheConnector.java:487) at org.glassfish.jersey.client.ClientRuntime.lambda$null$3(ClientRuntime.java:187) at org.glassfish.jersey.internal.Errors$1.call(Errors.java:272) at org.glassfish.jersey.internal.Errors$1.call(Errors.java:268) at org.glassfish.jersey.internal.Errors.process(Errors.java:316) at org.glassfish.jersey.internal.Errors.process(Errors.java:298) at org.glassfish.jersey.internal.Errors.process(Errors.java:268) at org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:312) at org.glassfish.jersey.client.ClientRuntime.lambda$createRunnableForAsyncProcessing$4(ClientRuntime.java:163) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) at java.util.concurrent.FutureTask.run(FutureTask.java:266) ... 3 more