Consider supporting the CWL standards for reproducible data analysis tool and workflow execution

openbases / openbases.github.io

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https://openbases.github.io

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Consider supporting the CWL standards for reproducible data analysis tool and workflow execution #8

Open mr-c opened 6 years ago

mr-c commented 6 years ago

https://www.commonwl.org/

Happy to discuss further!

vsoch commented 6 years ago

hey @mr-c (awesome alias btw!) what did you have in mind for a tool? For openbases it would be akin to making a template for a user to plug in some details for a workflow, and then the continuous integration would produce them a full fledged CWL. Can you walk me through an example use case (goal, what the user provides, what gets generated) and we can get started?