Save the variant query results in JSON format

opencb / hpg-bigdata

This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster

Apache License 2.0

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Save the variant query results in JSON format #109

Closed jtarraga closed 7 years ago

jtarraga commented 8 years ago

Currently, the results from the 'variant query' command line are stored in Avro format. The command should store the output in JSON format. This functionality should be performed when the output filename extension is ".json".