search

opencb / hpg-bigdata

This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster
Apache License 2.0
17 stars 14 forks source link

Support for rvtests, a third-party analysis tool for rare variants. #125

Open jtarraga opened 7 years ago

jtarraga commented 7 years ago

The project should support third-party analysis tools, such as rvtests, plink,...

Some rvtests executions takes over several hours, this time should be reduced significatly by running on a Hadoop cluster and using Spark engine.