opencb / hpg-bigdata

This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster
Apache License 2.0
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Compute stats for variants #129

Open jtarraga opened 7 years ago

jtarraga commented 7 years ago

To compute statistics for a variant dataset is a useful feature. A command line "variant stats" will be provided and statistics should be computed for:

Statistics are stored in the variant metadata file associated to that variant dataset.