Add the parameters --exclude-sequences and --exclude-qualities to the alignment view command line

opencb / hpg-bigdata

This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster

Apache License 2.0

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Add the parameters --exclude-sequences and --exclude-qualities to the alignment view command line #91

Open jtarraga opened 8 years ago

jtarraga commented 8 years ago

Sometimes, users are not interested in displaying the nucleotide and quality sequences when using the alignment view command line. In addition, they can be huge. We should provide the --exclude-sequences and --exclude-qualities parameters to avoid showing those sequences.