Closed jtarraga closed 7 years ago
In order to initialize the metadata variant with useful information, the variant convert command line should accept as input the following metadata parameters: species, assembly and dataset name. E.g.:
./build/bin/hpg-bigdata-local.sh variant convert --i test.vcf --o test.avro --species human --assembly GRCh38 --dataset-name breast_cancer
In order to initialize the metadata variant with useful information, the variant convert command line should accept as input the following metadata parameters: species, assembly and dataset name. E.g.:
./build/bin/hpg-bigdata-local.sh variant convert --i test.vcf --o test.avro --species human --assembly GRCh38 --dataset-name breast_cancer