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opencobra / cobratoolbox

The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:
https://opencobra.github.io/cobratoolbox
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OptGene Tutorial error and crash #1792

Open edvinforsgren opened 3 years ago

edvinforsgren commented 3 years ago

In the tutorial: [https://opencobra.github.io/cobratoolbox/latest/tutorials/tutorialOptGene.html]

I first have an a problem with the selectedGenelist where the first cell is empty. I "resolved" this by deleting the first entry using selectedGeneList(1) = []. However, when I try to run Example 1 after doing this the program runs and seem to finish but crashes in the end, see screenshot [https://prnt.sc/1qbmnq0].

I'm using MATLAB R2021A on Ubuntu 20.04.2.

I hereby confirm that I have:

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rmtfleming commented 3 years ago

Hi Sebastian, can you please look into this? Regards, Ronan

On Wed, 25 Aug 2021 at 11:13, edvinforsgren @.***> wrote:

In the tutorial: [https://opencobra.github.io/cobratoolbox/latest/tutorials/tutorialOptGene.html]

I first have an a problem with the selectedGenelist where the first cell is empty. I "resolved" this by deleting the first entry using selectedGeneList(1) = []. However, when I try to run Example 1 after doing this the program runs and seem to finish but crashes in the end, see screenshot [https://prnt.sc/1qbmnq0].

I'm using MATLAB R2021A on Ubuntu 20.04.2.

I hereby confirm that I have:

Tried to solve the issue on my own Retried to run my code with the latest version of The COBRA Toolbox Checked that a similar issue has not already been opened

(Note: You may replace [ ] with [X] to check the box)

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