opencobra / cobratoolbox

The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:
https://opencobra.github.io/cobratoolbox
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DEMETER can be used for metabolic network optimization beyond intestinal microbiota? #2250

Closed hzau-gzy closed 3 months ago

hzau-gzy commented 3 months ago

Please include a short description of problem here DEMeter is a metabolic network optimization method developed for gut microbiota, but can DEMeter also be used to optimize the metabolic network of microorganisms other than gut microbiota? I hereby confirm that I have:

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rmtfleming commented 3 months ago

Heirendt, L., Arreckx, S., Pfau, T. et al. Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0. Nat Protoc 14, 639–702 (2019). https://doi.org/10.1038/s41596-018-0098-2