opencobra / cobratoolbox

The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:
https://opencobra.github.io/cobratoolbox
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mgPipe > fastSetupCreator + createPersonalizedModel Interaction causes errors due to rmfield #2265

Open safak-kilic opened 5 months ago

safak-kilic commented 5 months ago

Within part 2 of mgPipe, fastSetupCreator creates a model without the fields "citations" and "comments" which createPersonalizedModel tries to remove, causing an error. I have worked around this by creating a temporary copy of createPersonalizedModel, but I wanted to notify the team regardless so you can take a look at it. The previous mgPipe issue seems to be unrelated.

I hereby confirm that I have:

almut-heinken commented 5 months ago

Hello, which models were you using as the input? Thank you! Best regards, Almut