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opencobra / memote

memote – the genome-scale metabolic model test suite
https://memote.readthedocs.io/
Apache License 2.0
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Minor mistakes in the names and description of some tests in the .html report #491

Closed javisaez closed 6 years ago

javisaez commented 6 years ago

I've run memote from the terminal to get individual .html reports for different models and found out that there are some mistakes in the names and description of some tests.

The last two tests within the category Annotation have the same name: Uniform Metabolite Identifier Namespace. I guess this should be changed to Uniform Reaction Identifier Namespace for the last test, as shown in red in the next screenshot:

uniform_identifier_namespace

Also, in the description of demand and sink reactions tests (Demand Reaction SBO:0000628 Presence & Sink Reactions SBO:0000632 Presence) within the SBO category, I noticed some minor errors (again, corrections in red):

sink_demand

These errors also show up in comparative reports.

Midnighter commented 6 years ago

Thank you for noticing these. I'll fix these in a moment.

Midnighter commented 6 years ago

This is released in 0.8.6. Please let us know if you find any more problems with the descriptions :smiley: