opencobra / memote

memote – the genome-scale metabolic model test suite
https://memote.readthedocs.io/
Apache License 2.0
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Test sbml version #584

Closed ChristianLieven closed 5 years ago

ChristianLieven commented 5 years ago

Changelog:

ChristianLieven commented 5 years ago

@Midnighter what was it that needed to be done here? Now that you've probably started the test suite again we can go through this in a classic review, right?

Midnighter commented 5 years ago

I'm finishing up my work on this and I will try to put it into neat commits.

codecov[bot] commented 5 years ago

Codecov Report

Merging #584 into develop will decrease coverage by 0.48%. The diff coverage is 60.34%.

Impacted file tree graph

@@            Coverage Diff             @@
##           develop    #584      +/-   ##
==========================================
- Coverage    80.29%   79.8%   -0.49%     
==========================================
  Files           57      59       +2     
  Lines         3014    3095      +81     
  Branches       414     423       +9     
==========================================
+ Hits          2420    2470      +50     
- Misses         524     552      +28     
- Partials        70      73       +3
Impacted Files Coverage Δ
memote/suite/cli/callbacks.py 50% <100%> (-5.56%) :arrow_down:
memote/suite/collect.py 77.77% <100%> (+0.96%) :arrow_up:
memote/suite/cli/runner.py 42.64% <18.75%> (-1.38%) :arrow_down:
memote/utils.py 76.47% <20%> (-3.53%) :arrow_down:
memote/suite/cli/reports.py 46.92% <22.72%> (-3.08%) :arrow_down:
memote/suite/api.py 62.5% <70.58%> (+0.59%) :arrow_up:
memote/support/validation.py 85.29% <85.29%> (ø)
memote/suite/tests/test_sbml.py 88.23% <88.23%> (ø)

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