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opencobra / memote

memote – the genome-scale metabolic model test suite
https://memote.readthedocs.io/
Apache License 2.0
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TimeLimitExceeded: TimeLimitExceeded(7200,) #713

Closed MarieBurel closed 3 years ago

MarieBurel commented 3 years ago

Hi there! When I tried to check my model with Memote, this error appeared. It seems that either my model is too big or it contains a lot of errors. How can I check it? Is it possible to increase the time limit ? Thank you for your feedback

MarieBurel commented 3 years ago

the model I am talking about model_test.tar.gz

Midnighter commented 3 years ago

Hi @JiroTanigushi,

Thanks for giving memote a try! I assume that you used the webservice https://memote.io ? If that is the case, you can install memote locally in a Python environment and test your model there.

Midnighter commented 3 years ago

Dear @JiroTanigushi,

I have updated the memote webservice and you this error should not occur any longer. Please try again, there.