WorkerLostError: Worker exited prematurely: signal 9 (SIGKILL).

opencobra / memote

memote – the genome-scale metabolic model test suite

https://memote.readthedocs.io/

Apache License 2.0

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WorkerLostError: Worker exited prematurely: signal 9 (SIGKILL). #718

Closed davinsaviro closed 3 years ago

davinsaviro commented 3 years ago

caujManual5.xlsx

Midnighter commented 3 years ago

Hi @davinsaviro,

Excel is not one of the possible formats. Please transform the model to either SBML or JSON.

davinsaviro commented 3 years ago

Well yes I uploaded the SBML file. I can't seem to attach it in this issue board, so I saved it in my repo here https://github.com/davinsaviro/21soilGEMs/blob/main/caujManual5.xml

Midnighter commented 3 years ago

Hello again,

Thanks for the link. I ran memote locally with the latest version and it completes without error. I will need to update the webservice. In the meantime, I've attached a snapshot report. Seems like there are lots of issues with molecular formulae/mass balance.

index.html.gz

davinsaviro commented 3 years ago

Thank you very much! Yes the model is still in the early stages of development. All the best on updating the webservice!