chore(deps): bump networkx from 2.6.3 to 2.8.8

[dependabot[bot]]

Bumps networkx from 2.6.3 to 2.8.8.

Release notes

Sourced from networkx's releases.

NetworkX 2.8.8

Full Changelog: https://github.com/networkx/networkx/compare/networkx-2.8.7...networkx-2.8.8

NetworkX 2.8.7

Full Changelog: https://github.com/networkx/networkx/compare/networkx-2.8.6...networkx-2.8.7

NetworkX 2.8.6

Full Changelog: https://github.com/networkx/networkx/compare/networkx-2.8.5...networkx-2.8.6

NetworkX 2.8.5

Full Changelog: https://github.com/networkx/networkx/compare/networkx-2.8.4...networkx-2.8.5

NetworkX 2.8.4

What's Changed

• Clean up maximal_independent_set tests by @​MridulS in networkx/networkx#5567
• MAINT: Cleanup centrality module, remove unused variables by @​MridulS in networkx/networkx#5308
• importorskip scipy instead of numpy for total spanning tree by @​MridulS in networkx/networkx#5693
• Add initial_graph parameter to scale_free_graph and deprecate create_using by @​rossbar in networkx/networkx#5697
• Add docstring example for attr transfer to linegraph. by @​rossbar in networkx/networkx#5698
• Update ISMAGS.analyze_symmetry docstring. by @​rossbar in networkx/networkx#5696
• Add default value p=2 for minkowski distance metric. by @​rossbar in networkx/networkx#5700
• Use inline math by @​szhorvat in networkx/networkx#5701
• Update multigraph docstrings to reflect remove_edges_from behavior. by @​rossbar in networkx/networkx#5699
• Update simple_cycles docstring w/ yields and examples by @​rossbar in networkx/networkx#5709
• Chromatic polynomial by @​lucasmccabe in networkx/networkx#5675
• Catch ':' explicitly while working with pydot by @​MridulS in networkx/networkx#5710
• Revert "Add workaround for pytest failures on 3.11b2" by @​rossbar in networkx/networkx#5717
• Default to lightmode for documentation by @​rossbar in networkx/networkx#5715
• Dont compute all biconnected components in is_biconnected() by @​matusvalo in networkx/networkx#5688
• Some more changes to make pytest-randomly happy by @​MridulS in networkx/networkx#5719
• Add durations flag to coverage run on CI. by @​rossbar in networkx/networkx#5718
• Recover order of layers in multipartite_layout when layers are sortable by @​rossbar in networkx/networkx#5705
• Update doc requirements by @​jarrodmillman in networkx/networkx#5711
• Touchups to MG and MDG edges docstrings. by @​rossbar in networkx/networkx#5708
• Add PendingDeprecation for pydot by @​jarrodmillman in networkx/networkx#5721
• Add example of topo_order kwarg to dag_longest_path by @​rossbar in networkx/networkx#5728
• CI: add pytest-randomly workflow. by @​rossbar in networkx/networkx#4553

New Contributors

• @​szhorvat made their first contribution in networkx/networkx#5701

Full Changelog: https://github.com/networkx/networkx/compare/networkx-2.8.3...networkx-2.8.4

NetworkX 2.8.3

What's Changed

• added example to closeness.py by @​Lukong123 in networkx/networkx#5645
• Extract valid kwds from the function signature for draw_networkx_* by @​MridulS in networkx/networkx#5660
• Error out when pydot fails to correctly parse node names by @​MridulS in networkx/networkx#5667
• Remove redundant py2 numeric conversions - Take 2 by @​MridulS in networkx/networkx#5661
• Correcting a typo in the references by @​RATCOinc in networkx/networkx#5677

... (truncated)

Commits

• 9256ef6 Designate 2.8.8 release
• 5da3df4 Update pytest
• 8d69d62 Amount of nodes and edges have mistakes when reading adjlist file (#6132)
• f9b4874 Added an example in all_pairs_node_connectivity (#6126)
• 11d7bf8 Improve test coverage for cycles.py (#6152)
• c817a80 Add example for fiedler_vector (#6155)
• a130cb6 Increase covering coverage (#6099)
• f215fb0 Renamed test functions in test_lowest_common_ancestors (#6110)
• 040c356 Increased test coverage algorithms/matching.py (#6095)
• 2baa776 Improve test coverage in algorithms shortest paths unweighted.py (#6121)
• Additional commits viewable in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

---

Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)

[dependabot[bot]]

OK, I won't notify you again about this release, but will get in touch when a new version is available. If you'd rather skip all updates until the next major or minor version, let me know by commenting @dependabot ignore this major version or @dependabot ignore this minor version.

If you change your mind, just re-open this PR and I'll resolve any conflicts on it.