Closed whedon closed 4 years ago
Hello human, I'm @whedon, a robot that can help you with some common editorial tasks.
:warning: JOSS reduced service mode :warning:
Due to the challenges of the COVID-19 pandemic, JOSS is currently operating in a "reduced service mode". You can read more about what that means in our blog post.
For a list of things I can do to help you, just type:
@whedon commands
For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:
@whedon generate pdf
Software report (experimental):
github.com/AlDanial/cloc v 1.84 T=0.11 s (128.0 files/s, 15557.8 lines/s)
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Language files blank comment code
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Markdown 2 138 0 466
TeX 1 16 0 256
Python 4 35 70 216
Jupyter Notebook 2 0 408 90
HTML 3 0 0 3
DOS Batch 1 0 0 2
Bourne Shell 1 0 0 1
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SUM: 14 189 478 1034
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Statistical information for the repository '2370' was gathered on 2020/06/20.
The following historical commit information, by author, was found:
Author Commits Insertions Deletions % of changes
Alistair Johnson 1 319 0 96.96
Rankin_summer 3 5 4 2.74
Summer K. Rankin 1 1 0 0.30
Below are the number of rows from each author that have survived and are still
intact in the current revision:
Author Rows Stability Age % in comments
Alistair Johnson 315 98.7 0.0 14.29
Rankin_summer 5 100.0 0.0 20.00
Summer K. Rankin 1 100.0 0.0 0.00
Reference check summary:
OK DOIs
- 10.4300/JGME-D-15-00201.1 is OK
- 10.4338/ACI-2016-09-R-0150 is OK
- 10.1097/01.CCM.0000104112.34142.79 is OK
- 10.1186/1471-2105-14-10 is OK
- 10.1371/journal.pone.0087555 is OK
- 10.7326/0003-4819-157-1-201206190-00429 is OK
- 10.1016/S0022-2836(05)80360-2 is OK
- 10.13026/C2XW26 is OK
- 10.1103/PhysRevX.5.011007 is OK
- 10.1016/j.ijmedinf.2006.06.004 is OK
- 10.1197/jamia.M3390 is OK
MISSING DOIs
- https://doi.org/10.1038/sdata.2016.35 may be missing for title: MIMIC-III, a freely accessible critical care database
- https://doi.org/10.25080/majora-92bf1922-00a may be missing for title: Data structures for statistical computing in python
- https://doi.org/10.1055/s-0038-1638592 may be missing for title: Extracting information from textual documents in the electronic health record: a review of recent research
- https://doi.org/10.1109/icicic.2008.422 may be missing for title: Plagiarism Detection Using the Levenshtein Distance and Smith-Waterman Algorithm
- https://doi.org/10.1109/mc.1984.1659158 may be missing for title: A Technique for High-Performance Data Compression
INVALID DOIs
- 10.5555/1593511 is INVALID
potential reviewer: Darthpathos
potential reviewer username: jkanche email: jayaram.kancherla@gmail.com
INVALID DOIs
- 10.5555/1593511 is INVALID
I'm not sure why this is invalid? it's the python reference manual... http://citebay.com/how-to-cite/python/
@book{10.5555/1593511, author = {Van Rossum, Guido and Drake, Fred L.}, title = {Python 3 Reference Manual}, year = {2009}, isbn = {1441412697}, publisher = {CreateSpace}, address = {Scotts Valley, CA} }
...well https://doi.org/10.5555/1593511 doesn't resolve so whatever this DOI is, it's not a valid one 😄
ok, took it out
@whedon generate pdf
@whedon generate pdf
@whedon commands
Here are some things you can ask me to do:
# List Whedon's capabilities
@whedon commands
# List of editor GitHub usernames
@whedon list editors
# List of reviewers together with programming language preferences and domain expertise
@whedon list reviewers
EDITORIAL TASKS
# Compile the paper
@whedon generate pdf
# Compile the paper from alternative branch
@whedon generate pdf from branch custom-branch-name
# Ask Whedon to check the references for missing DOIs
@whedon check references
# Ask Whedon to check repository statistics for the submitted software
@whedon check repository
@whedon check references
Reference check summary:
OK DOIs
- 10.4300/JGME-D-15-00201.1 is OK
- 10.4338/ACI-2016-09-R-0150 is OK
- 10.1097/01.CCM.0000104112.34142.79 is OK
- 10.1186/1471-2105-14-10 is OK
- 10.1371/journal.pone.0087555 is OK
- 10.7326/0003-4819-157-1-201206190-00429 is OK
- 10.1016/S0022-2836(05)80360-2 is OK
- 10.1038/sdata.2016.35 is OK
- 10.13026/C2XW26 is OK
- 10.1103/PhysRevX.5.011007 is OK
- 10.25080/majora-92bf1922-00a is OK
- 10.1055/s-0038-1638592 is OK
- 10.1109/icicic.2008.422 is OK
- 10.1016/j.ijmedinf.2006.06.004 is OK
- 10.1109/mc.1984.1659158 is OK
- 10.1197/jamia.M3390 is OK
MISSING DOIs
- None
INVALID DOIs
- None
:wave: @1fmusic - thanks for your submission to JOSS. After consulting with the JOSS editorial team, we've determined that this work is out of scope for JOSS as it falls into our minor utility category.
One possible alternative to JOSS is to follow GitHub's guide on how to create a permanent archive and DOI for your software. This DOI can then be used by others to cite your work.
@whedon reject
Paper rejected.
Submitting author: @1fmusic (Summer Rankin) Repository: https://github.com/MIT-LCP/bloatectomy Version: v0.0.12 Editor: Pending Reviewer: Pending Managing EiC: Arfon Smith
:warning: JOSS reduced service mode :warning:
Due to the challenges of the COVID-19 pandemic, JOSS is currently operating in a "reduced service mode". You can read more about what that means in our blog post.
Author instructions
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@1fmusic if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). In addition, this list of people have already agreed to review for JOSS and may be suitable for this submission (please start at the bottom of the list).
Editor instructions
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