[PRE REVIEW]: CR-Sparse: Hardware accelerated functional algorithms for sparse signal processing in Python using JAX

[whedon]

Submitting author: @shailesh1729 (Shailesh Kumar) Repository: https://github.com/carnotresearch/cr-sparse Version: v0.2.1 Editor: @pdebuyl Reviewers: @Saran-nns, @mirca Managing EiC: Kyle Niemeyer

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Thanks for submitting your paper to JOSS @shailesh1729. Currently, there isn't an JOSS editor assigned to your paper.

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[whedon]

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[whedon]

Wordcount for paper.md is 4567

[whedon]

Software report (experimental):

github.com/AlDanial/cloc v 1.88  T=0.37 s (1025.9 files/s, 129110.6 lines/s)
--------------------------------------------------------------------------------
Language                      files          blank        comment           code
--------------------------------------------------------------------------------
Python                          295           4312           8807          16578
TeX                               2            484              1           3212
reStructuredText                 54           1290           1498           1047
Markdown                          7            200              0            894
Jupyter Notebook                  9              0           8309            616
YAML                              4              9              7            148
JavaScript                        1              6             16            117
CSS                               1              9              0             37
JSON                              2              0              0             33
DOS Batch                         1              8              1             26
make                              1              5              7             13
Bourne Again Shell                1              2              0              3
Bourne Shell                      1              1              0              2
--------------------------------------------------------------------------------
SUM:                            379           6326          18646          22726
--------------------------------------------------------------------------------

Statistical information for the repository '58a6fcc132f55844517058c3' was
gathered on 2021/11/12.
The following historical commit information, by author, was found:

Author                     Commits    Insertions      Deletions    % of changes
Shailesh Kumar                 586         33402           3397          100.00

Below are the number of rows from each author that have survived and are still
intact in the current revision:

Author                     Rows      Stability          Age       % in comments
Shailesh Kumar            30005           89.8          2.8               22.73

[whedon]

:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:

[whedon]

Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

OK DOIs

- None

MISSING DOIs

- 10.1145/3088525.3088527 may be a valid DOI for title: A computational model for TensorFlow: an introduction
- 10.1109/iccv.2001.937651 may be a valid DOI for title: Lambertian reflectance and linear subspaces
- 10.1109/jstsp.2010.2042411 may be a valid DOI for title: Normalized iterative hard thresholding: Guaranteed stability and performance
- 10.1109/wvm.1991.212809 may be a valid DOI for title: Factorization-based segmentation of motions
- 10.21236/ada521441 may be a valid DOI for title: Analysis of orthogonal matching pursuit using the restricted isometry property
- 10.1007/978-1-4419-7011-4 may be a valid DOI for title: Sparse and redundant representations
- 10.1109/tpami.2013.57 may be a valid DOI for title: Sparse subspace clustering: Algorithm, theory, and applications
- 10.1109/cvpr.2003.1211332 may be a valid DOI for title: Clustering appearances of objects under varying illumination conditions
- 10.1109/iccv.2001.937679 may be a valid DOI for title: Motion segmentation by subspace separation and model selection
- 10.1109/tpami.2005.92 may be a valid DOI for title: Acquiring linear subspaces for face recognition under variable lighting
- 10.21105/joss.01237 may be a valid DOI for title: PyWavelets: A Python package for wavelet analysis
- 10.1109/acssc.1993.342465 may be a valid DOI for title: Orthogonal matching pursuit: Recursive function approximation with applications to wavelet decomposition
- 10.1109/34.584098 may be a valid DOI for title: A paraperspective factorization method for shape and motion recovery
- 10.1007/bf00129684 may be a valid DOI for title: Shape and motion from image streams under orthography: a factorization method
- 10.1109/tit.2004.834793 may be a valid DOI for title: Greed is good: Algorithmic results for sparse approximation
- 10.1109/cvpr.2016.425 may be a valid DOI for title: Scalable sparse subspace clustering by orthogonal matching pursuit
- 10.1007/s11263-012-0535-6 may be a valid DOI for title: Hybrid linear modeling via local best-fit flats

INVALID DOIs

- None

[kyleniemeyer]

Hi @shailesh1729, while we are getting started with this submission, can you please check the missing DOIs in your references and add those where appropriate?

[kyleniemeyer]

@whedon invite @pdebuyl as editor

@pdebuyl could you edit this submission?

[whedon]

@pdebuyl has been invited to edit this submission.

[shailesh1729]

Hi, I have updated the DOIs as reported missing.

[shailesh1729]

@whedon generate pdf

[whedon]

:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:

[shailesh1729]

@whedon commands

[whedon]

Here are some things you can ask me to do:

# List Whedon's capabilities
@whedon commands

# List of editor GitHub usernames
@whedon list editors

# List of reviewers together with programming language preferences and domain expertise
@whedon list reviewers

EDITORIAL TASKS

# Compile the paper
@whedon generate pdf

# Compile the paper from alternative branch
@whedon generate pdf from branch custom-branch-name

# Ask Whedon to check the references for missing DOIs
@whedon check references

# Ask Whedon to check repository statistics for the submitted software
@whedon check repository

[shailesh1729]

@whedon check references

[whedon]

Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

OK DOIs

- 10.1145/3088525.3088527 is OK
- 10.1109/ICCV.2001.937651 is OK
- 10.1016/j.acha.2009.04.002 is OK
- 10.1109/jstsp.2010.2042411 is OK
- 10.1109/wvm.1991.212809 is OK
- 10.1023/A:1008000628999 is OK
- 10.1109/tit.2009.2016006 is OK
- 10.1109/tit.2010.2054653 is OK
- 10.1007/978-1-4419-7011-4 is OK
- 10.1109/cvprw.2009.5206547 is OK
- 10.1109/tpami.2013.57 is OK
- 10.1109/CVPR.2003.1211332 is OK
- 10.1109/iccv.2001.937679 is OK
- 10.1109/tpami.2005.92 is OK
- 10.21105/joss.01237 is OK
- 10.1016/b978-0-12-374370-1.x0001-8 is OK
- 10.1016/j.acha.2008.07.002 is OK
- 10.1109/acssc.1993.342465 is OK
- 10.1109/34.584098 is OK
- 10.1007/bf00129684 is OK
- 10.1175/1520-0477(1998)079<0061:APGTWA>2.0.CO;2 is OK
- 10.1109/TIT.2004.834793 is OK
- 10.1109/MSP.2010.939739 is OK
- 10.1109/CVPR.2016.425 is OK
- 10.1007/s11263-012-0535-6 is OK

MISSING DOIs

- None

INVALID DOIs

- None

[pdebuyl]

@kyleniemeyer yes I'll edit

[pdebuyl]

@whedon assign me as editor

[whedon]

OK, the editor is @pdebuyl

[pdebuyl]

@saran-nns @mirca would you review the article "CR-Sparse: Hardware accelerated functional algorithms for sparse signal processing in Python using JAX" for the Journal of Open Source Software?

[Saran-nns]

Hi @pdebuyl yes I'd be happy to review

[pdebuyl]

Hi @Saran-nns thanks for accepting!

[pdebuyl]

@whedon assign @Saran-nns as reviewer

[whedon]

OK, @Saran-nns is now a reviewer

[mirca]

@pdebuyl Sure, I'm able to review it.

[pdebuyl]

Hi @mirca thanks for accepting!

[pdebuyl]

@whedon add @mirca as reviewer

[whedon]

OK, @mirca is now a reviewer

[pdebuyl]

@whedon start review

[whedon]

OK, I've started the review over in https://github.com/openjournals/joss-reviews/issues/3917.