openjournals / joss-reviews

Reviews for the Journal of Open Source Software
Creative Commons Zero v1.0 Universal
697 stars 36 forks source link

[REVIEW]: Rosalution: Supporting data accessibility, integration, curation, interoperability, and reuse for precision animal modeling #5443

Closed editorialbot closed 10 months ago

editorialbot commented 1 year ago

Submitting author: !--author-handle-->@serioushorncat<!--end-author-handle-- (Angelina Uno-Antonison) Repository: https://github.com/uab-cgds-worthey/rosalution Branch with paper.md (empty if default branch): Version: 0.6.1 Editor: !--editor-->@jmschrei<!--end-editor-- Reviewers: @suragnair, @JDRomano2 Archive: 10.5281/zenodo.8380641

Status

status

Status badge code:

HTML: <a href="https://joss.theoj.org/papers/8f7091da9fa801c97f60a4af368c7b3a"><img src="https://joss.theoj.org/papers/8f7091da9fa801c97f60a4af368c7b3a/status.svg"></a>
Markdown: [![status](https://joss.theoj.org/papers/8f7091da9fa801c97f60a4af368c7b3a/status.svg)](https://joss.theoj.org/papers/8f7091da9fa801c97f60a4af368c7b3a)

Reviewers and authors:

Please avoid lengthy details of difficulties in the review thread. Instead, please create a new issue in the target repository and link to those issues (especially acceptance-blockers) by leaving comments in the review thread below. (For completists: if the target issue tracker is also on GitHub, linking the review thread in the issue or vice versa will create corresponding breadcrumb trails in the link target.)

Reviewer instructions & questions

@suragnair & @JDRomano2, your review will be checklist based. Each of you will have a separate checklist that you should update when carrying out your review. First of all you need to run this command in a separate comment to create the checklist:

@editorialbot generate my checklist

The reviewer guidelines are available here: https://joss.readthedocs.io/en/latest/reviewer_guidelines.html. Any questions/concerns please let @jmschrei know.

Please start on your review when you are able, and be sure to complete your review in the next six weeks, at the very latest

Checklists

📝 Checklist for @suragnair

📝 Checklist for @JDRomano2

editorialbot commented 10 months ago

Ensure proper citation by uploading a plain text CITATION.cff file to the default branch of your repository.

If using GitHub, a Cite this repository menu will appear in the About section, containing both APA and BibTeX formats. When exported to Zotero using a browser plugin, Zotero will automatically create an entry using the information contained in the .cff file.

You can copy the contents for your CITATION.cff file here:

CITATION.cff

``` cff-version: "1.2.0" authors: - family-names: Uno-Antonison given-names: Angelina E. orcid: "https://orcid.org/0000-0002-4631-9135" - family-names: Fatima given-names: Rabab orcid: "https://orcid.org/0000-0002-3739-6331" - family-names: Scherer given-names: James orcid: "https://orcid.org/0000-0002-4272-2082" - family-names: Moss given-names: Alexander orcid: "https://orcid.org/0000-0001-5112-0270" - family-names: Brown given-names: Donna orcid: "https://orcid.org/0000-0002-8805-7225" - family-names: Foksinska given-names: Aleksandra orcid: "https://orcid.org/0000-0002-1035-3294" - family-names: Gajapathy given-names: Manavalan orcid: "https://orcid.org/0000-0002-8606-0113" - family-names: Wilk given-names: Elizabeth J. orcid: "https://orcid.org/0000-0002-7078-1215" - family-names: Lasseigne given-names: Brittany N. orcid: "https://orcid.org/0000-0002-1642-8904" - family-names: Worthey given-names: Elizabeth orcid: "https://orcid.org/0000-0003-4083-7764" contact: - family-names: Uno-Antonison given-names: Angelina E. orcid: "https://orcid.org/0000-0002-4631-9135" - family-names: Worthey given-names: Elizabeth orcid: "https://orcid.org/0000-0003-4083-7764" doi: 10.5281/zenodo.8380641 message: If you use this software, please cite our article in the Journal of Open Source Software. preferred-citation: authors: - family-names: Uno-Antonison given-names: Angelina E. orcid: "https://orcid.org/0000-0002-4631-9135" - family-names: Fatima given-names: Rabab orcid: "https://orcid.org/0000-0002-3739-6331" - family-names: Scherer given-names: James orcid: "https://orcid.org/0000-0002-4272-2082" - family-names: Moss given-names: Alexander orcid: "https://orcid.org/0000-0001-5112-0270" - family-names: Brown given-names: Donna orcid: "https://orcid.org/0000-0002-8805-7225" - family-names: Foksinska given-names: Aleksandra orcid: "https://orcid.org/0000-0002-1035-3294" - family-names: Gajapathy given-names: Manavalan orcid: "https://orcid.org/0000-0002-8606-0113" - family-names: Wilk given-names: Elizabeth J. orcid: "https://orcid.org/0000-0002-7078-1215" - family-names: Lasseigne given-names: Brittany N. orcid: "https://orcid.org/0000-0002-1642-8904" - family-names: Worthey given-names: Elizabeth orcid: "https://orcid.org/0000-0003-4083-7764" date-published: 2023-10-01 doi: 10.21105/joss.05443 issn: 2475-9066 issue: 90 journal: Journal of Open Source Software publisher: name: Open Journals start: 5443 title: "Rosalution: Supporting data accessibility, integration, curation, interoperability, and reuse for precision animal modeling" type: article url: "https://joss.theoj.org/papers/10.21105/joss.05443" volume: 8 title: "Rosalution: Supporting data accessibility, integration, curation, interoperability, and reuse for precision animal modeling" ```

If the repository is not hosted on GitHub, a .cff file can still be uploaded to set your preferred citation. Users will be able to manually copy and paste the citation.

Find more information on .cff files here and here.

editorialbot commented 10 months ago

🐘🐘🐘 👉 Toot for this paper 👈 🐘🐘🐘

editorialbot commented 10 months ago

🚨🚨🚨 THIS IS NOT A DRILL, YOU HAVE JUST ACCEPTED A PAPER INTO JOSS! 🚨🚨🚨

Here's what you must now do:

  1. Check final PDF and Crossref metadata that was deposited :point_right: https://github.com/openjournals/joss-papers/pull/4639
  2. Wait a couple of minutes, then verify that the paper DOI resolves https://doi.org/10.21105/joss.05443
  3. If everything looks good, then close this review issue.
  4. Party like you just published a paper! 🎉🌈🦄💃👻🤘

Any issues? Notify your editorial technical team...

Kevin-Mattheus-Moerman commented 10 months ago

@SeriousHorncat congratulations on this paper in JOSS!

@jmschrei thanks for editing this work!

And a special thanks to the reviewers: @suragnair, @JDRomano2

editorialbot commented 10 months ago

:tada::tada::tada: Congratulations on your paper acceptance! :tada::tada::tada:

If you would like to include a link to your paper from your README use the following code snippets:

Markdown:
[![DOI](https://joss.theoj.org/papers/10.21105/joss.05443/status.svg)](https://doi.org/10.21105/joss.05443)

HTML:
<a style="border-width:0" href="https://doi.org/10.21105/joss.05443">
  <img src="https://joss.theoj.org/papers/10.21105/joss.05443/status.svg" alt="DOI badge" >
</a>

reStructuredText:
.. image:: https://joss.theoj.org/papers/10.21105/joss.05443/status.svg
   :target: https://doi.org/10.21105/joss.05443

This is how it will look in your documentation:

DOI

We need your help!

The Journal of Open Source Software is a community-run journal and relies upon volunteer effort. If you'd like to support us please consider doing either one (or both) of the the following: