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Reviews for the Journal of Open Source Software
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[PRE REVIEW]: pyEQL: A Python interface for water chemistry #6071

Closed editorialbot closed 9 months ago

editorialbot commented 11 months ago

Submitting author: !--author-handle-->@rkingsbury<!--end-author-handle-- (Ryan Kingsbury) Repository: https://github.com/rkingsbury/pyEQL Branch with paper.md (empty if default branch): joss Version: v0.11.1 Editor: !--editor-->@lucydot<!--end-editor-- Reviewers: @orionarcher, @JacksonBurns, @yuxuanzhuang Managing EiC: Kristen Thyng

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status

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HTML: <a href="https://joss.theoj.org/papers/bdd9e247ea9736a0fdbbd5fe12bef7a6"><img src="https://joss.theoj.org/papers/bdd9e247ea9736a0fdbbd5fe12bef7a6/status.svg"></a>
Markdown: [![status](https://joss.theoj.org/papers/bdd9e247ea9736a0fdbbd5fe12bef7a6/status.svg)](https://joss.theoj.org/papers/bdd9e247ea9736a0fdbbd5fe12bef7a6)

Author instructions

Thanks for submitting your paper to JOSS @rkingsbury. Currently, there isn't a JOSS editor assigned to your paper.

@rkingsbury if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). You can search the list of people that have already agreed to review and may be suitable for this submission.

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editorialbot commented 11 months ago

Hello human, I'm @editorialbot, a robot that can help you with some common editorial tasks.

For a list of things I can do to help you, just type:

@editorialbot commands

For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

@editorialbot generate pdf
editorialbot commented 11 months ago
Software report:

github.com/AlDanial/cloc v 1.88  T=0.15 s (443.5 files/s, 313928.6 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
JSON                             1              0              0          33315
Python                          28           1810           3736           3951
Markdown                        23            541              0           1907
SVG                              1              1              1            738
YAML                             9             37             30            304
TeX                              1              0              0            189
INI                              1              9              0             82
TOML                             1              7              2             80
Jupyter Notebook                 2              0           1312             54
make                             1              6              8             15
-------------------------------------------------------------------------------
SUM:                            68           2411           5089          40635
-------------------------------------------------------------------------------

gitinspector failed to run statistical information for the repository
editorialbot commented 11 months ago

Wordcount for paper.md is 1316

editorialbot commented 11 months ago
Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

OK DOIs

- 10.1007/s10953-019-00871-5 is OK
- 10.1016/j.desal.2013.03.015 is OK
- 10.1039/C7NJ03597G is OK
- 10.1016/j.cageo.2011.02.005 is OK
- 10.1016/s0378-3812(02)00178-4 is OK
- 10.1016/j.commatsci.2012.10.028 is OK
- 10.1063/1.4812323 is OK
- 10.1021/je2009329 is OK
- 10.1016/S0016-7037(97)81133-7 is OK

MISSING DOIs

- None

INVALID DOIs

- None
editorialbot commented 11 months ago

:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:

editorialbot commented 11 months ago

Five most similar historical JOSS papers:

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⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.

kthyng commented 11 months ago

Hi @richardjgowers! Would you be able to edit this submission?

kthyng commented 11 months ago

@editorialbot invite @richardjgowers as editor

editorialbot commented 11 months ago

Invitation to edit this submission sent!

rkingsbury commented 11 months ago

@editorialbot commands

editorialbot commented 11 months ago

Hello @rkingsbury, here are the things you can ask me to do:


# List all available commands
@editorialbot commands

# Get a list of all editors's GitHub handles
@editorialbot list editors

# Check the references of the paper for missing DOIs
@editorialbot check references

# Perform checks on the repository
@editorialbot check repository

# Adds a checklist for the reviewer using this command
@editorialbot generate my checklist

# Set a value for branch
@editorialbot set joss-paper as branch

# Generates the pdf paper
@editorialbot generate pdf

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@editorialbot generate preprint

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@editorialbot list reviewers
rkingsbury commented 11 months ago

@editorialbot list reviewers

editorialbot commented 11 months ago

Please log in the JOSS Reviewers site to search through the list of current reviewers.

kthyng commented 11 months ago

@editorialbot @dhhagan as editor

editorialbot commented 11 months ago

I'm sorry human, I don't understand that. You can see what commands I support by typing:

@editorialbot commands

kthyng commented 11 months ago

@dhhagan Might you be able to edit this submission?

kthyng commented 11 months ago

@editorialbot invite @dhhagan as editor

editorialbot commented 11 months ago

Invitation to edit this submission sent!

kthyng commented 10 months ago

@lucydot might you be able to edit this submission?

kthyng commented 10 months ago

@editorialbot invite @lucydot as editor

editorialbot commented 10 months ago

Invitation to edit this submission sent!

lucydot commented 10 months ago

@editorialbot assign me as editor

editorialbot commented 10 months ago

Assigned! @lucydot is now the editor

lucydot commented 10 months ago

@orionarcher, @arose, @rangsimanketkaew - are you available to review this submission to JOSS?

rkingsbury commented 9 months ago

@lucydot since review has not started yet, can I request review of the latest released version (v0.11.1) rather than v0.9.2 (which was the latest when I submitted)?

orionarcher commented 9 months ago

Hi @lucydot. I should disclose that I know @rkingsbury and have provided (very minor) feedback on pyEQL in the past. If that's not an issue, I am more than happy to review this submission.

lucydot commented 9 months ago

Hi @rkingsbury - no problem, we can update version as needed. Just to double check - is v0.11.1 on the main branch?

lucydot commented 9 months ago

@editorialbot set v0.11.1 as version

editorialbot commented 9 months ago

Done! version is now v0.11.1

lucydot commented 9 months ago

Thanks for highlighting @orionarcher - I don't judge this to be a CoI, and will add you as reviewer

lucydot commented 9 months ago

@editorialbot add @orionarcher as reviewer

editorialbot commented 9 months ago

@orionarcher added to the reviewers list!

lucydot commented 9 months ago

@mdavezac @JacksonBurns @yuxuanzhuang - are you available to review this submission to JOSS?

mdavezac commented 9 months ago

Unfortunately, I just started another review for JOSS and can't commit to this one.

lucydot commented 9 months ago

thanks @mdavezac for updating us :)

JacksonBurns commented 9 months ago

@lucydot yes. I am available and eager! This looks very neat

yuxuanzhuang commented 9 months ago

@lucydot Yes! I am happy to review this submission.

lucydot commented 9 months ago

Hi @JacksonBurns @yuxuanzhuang - excellent news :) ✨

I will add you both as reviewers and then ask editorialbot to start the review.

If you haven't reviewed for JOSS before, you can find some detailed information about the review process on the documentation pages: reviewing for JOSS, review criteria, review checklist. You don't need to read this all (the essential instructions are given at the top of the review thread that editorialbot will generate), but it gives some context if wanted.

The key things that are different from standard journals are: i) everything happens in a Github review thread; ii) the review is a conversation back and forth - you do not need to do you review in a single step; iii) the review is structured in that you work your way through a checklist.

We ask that reviews are completed in about 4 weeks. We advise you start the review early, as it is an iterative process between reviewers and authors.

Any questions please just ask - and thanks again for agreeing to review.

lucydot commented 9 months ago

@editorialbot add @JacksonBurns as reviewer

editorialbot commented 9 months ago

@JacksonBurns added to the reviewers list!

lucydot commented 9 months ago

@editorialbot add @yuxuanzhuang as reviewer

editorialbot commented 9 months ago

@yuxuanzhuang added to the reviewers list!

lucydot commented 9 months ago

@editorialbot start review

editorialbot commented 9 months ago

OK, I've started the review over in https://github.com/openjournals/joss-reviews/issues/6295.