[PRE REVIEW]: LabelProp: A semi-automatic segmentation tool for 3D medical images

[editorialbot]

Submitting author: !--author-handle-->@nathandecaux<!--end-author-handle-- (Nathan Decaux) Repository: https://github.com/nathandecaux/labelprop Branch with paper.md (empty if default branch): Version: v1.2 Editor: !--editor-->@likeajumprope<!--end-editor-- Reviewers: @WangKehan573, @animikhaich Managing EiC: Olivia Guest

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Thanks for submitting your paper to JOSS @nathandecaux. Currently, there isn't a JOSS editor assigned to your paper.

@nathandecaux if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). You can search the list of people that have already agreed to review and may be suitable for this submission.

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[editorialbot]

Software report:

github.com/AlDanial/cloc v 1.88  T=0.06 s (575.4 files/s, 67846.5 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
Python                          18            439            824           2407
Markdown                         4             58              0            146
TeX                              1             10              0            106
YAML                             2              7             10             42
DOS Batch                        1              8              1             27
reStructuredText                 7             28             27             27
PowerShell                       1              2            151             14
make                             1              4              6             10
Bourne Shell                     1              0              1              7
JSON                             1              0              0              1
-------------------------------------------------------------------------------
SUM:                            37            556           1020           2787
-------------------------------------------------------------------------------

gitinspector failed to run statistical information for the repository

[editorialbot]

Wordcount for paper.md is 842

[editorialbot]

Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

OK DOIs

- 10.1016/j.patcog.2023.109529 is OK
- 10/gpjrzf is OK
- 10/gqg5d6 is OK
- 10/gh4vsp is OK
- 10/gfx7zs is OK

MISSING DOIs

- 10.1007/978-3-030-59710-8_2 may be a valid DOI for title: Scribble2Label: Scribble-Supervised Cell Segmentation via Self-Generating Pseudo-Labels with Consistency
- 10.1109/embc.2017.8036826 may be a valid DOI for title: Individual muscle segmentation in MR images: A 3D propagation through 2D non-linear registration approaches

INVALID DOIs

- None

[oliviaguest]

@britta-wstnr can you handle this one, please? :blush:

[editorialbot]

:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:

[editorialbot]

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⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.

[oliviaguest]

oh @britta-wstnr is at capacity, my bad: I misread your capacity probably! Apologies.

@adamltyson @likeajumprope @mooniean can one of you take this over? :)

[likeajumprope]

I think I could take this one on :)

[oliviaguest]

@editorialbot assign @likeajumprope as editor

[editorialbot]

Assigned! @likeajumprope is now the editor

[likeajumprope]

Hi @nathandecaux, while I am sending out requests for review, do you have any suggestions for reviewers?

[likeajumprope]

👋 Hi @pr4deepr could you help us with reviewing this paper?

[nathandecaux]

Hi @nathandecaux, while I am sending out requests for review, do you have any suggestions for reviewers?

Hello. As the main topic of this project is segmentation, I would recommend @pchlap, @animikhaich and @WangKehan573

[nathandecaux]

Hi @nathandecaux, while I am sending out requests for review, do you have any suggestions for reviewers?

Hello. As the main topic of this project is segmentation, I would recommend @pchlap, @animikhaich and @WangKehan573

or alternatively @lamyj, @romainVala or @antoinevacavant

[pr4deepr]

👋 Hi @pr4deepr could you help us with reviewing this paper?

Hi Thanks so much for asking me. Unfortunately I cannot review at this moment as I'm going on leave soon. This software looks really good and keen to test it out in the future. Good luck!

Pradeep

[likeajumprope]

Thank you @pr4deepr, 100% understandable.

[likeajumprope]

@pchlap, @animikhaich, @WangKehan573, could you kindly help us out with reviewing this paper?

[WangKehan573]

No problem, I can help

---- Replied Message ---- | From | Johanna @.> | | Date | 01/25/2024 20:43 | | To | @.> | | Cc | @.>@.> | | Subject | Re: [openjournals/joss-reviews] [PRE REVIEW]: LabelProp: A semi-automatic segmentation tool for 3D medical images (Issue #6257) |

@pchlap, @animikhaich, @WangKehan573, could you kindly help us out with reviewing this paper?

— Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you were mentioned.Message ID: @.***>

[likeajumprope]

@editorialbot add @WangKehan573 to reviewers

[editorialbot]

@WangKehan573 added to the reviewers list!

[likeajumprope]

No problem, I can help … ---- Replied Message ---- | From | Johanna @.> | | Date | 01/25/2024 20:43 | | To | @.> | | Cc | @.>@.> | | Subject | Re: [openjournals/joss-reviews] [PRE REVIEW]: LabelProp: A semi-automatic segmentation tool for 3D medical images (Issue #6257) | @pchlap, @animikhaich, @WangKehan573, could you kindly help us out with reviewing this paper? — Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you were mentioned.Message ID: @.***>

Thank you so much @WangKehan573

[animikhaich]

Sure, happy to help.

[likeajumprope]

Sure, happy to help.

thank you so much @animikhaich

[likeajumprope]

@editorialbot add @animikhaich to reviewers

[editorialbot]

@animikhaich added to the reviewers list!

[likeajumprope]

@editorialbot start review

[editorialbot]

OK, I've started the review over in https://github.com/openjournals/joss-reviews/issues/6284.