Closed editorialbot closed 6 months ago
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Reference check summary (note 'MISSING' DOIs are suggestions that need verification):
OK DOIs
- 10.1029/2012JE004159 is OK
- 10.1029/2018JE005835 is OK
- 10.1029/2021JE007055 is OK
- 10.1038/s41586-018-0468-5 is OK
- 10.1002/2018GL077312 is OK
- 10.1029/97JA03726 is OK
- 10.1029/JA092iA13p15329 is OK
- 10.1029/91JA01165 is OK
- 10.1006/icar.2002.6834 is OK
- 10.1186/s40623-020-01288-x is OK
- 10.1126/science.aat5434 is OK
- 10.1016/j.pepi.2011.05.013 is OK
- 10.1093/acrefore/9780190647926.013.31 is OK
- 10.1146/annurev-fluid-122109-160727 is OK
- 10.1201/b12985 is OK
- 10.1002/ggge.20071 is OK
- 10.2151/jmsj.2018-019 is OK
- 10.1007/s11214-023-00961-3 is OK
- 10.5281/zenodo.10602418 is OK
- 10.1186/s40623-020-01252-9 is OK
- 10.5281/zenodo.10598528 is OK
- 10.5281/zenodo.4080294 is OK
- 10.1109/MCSE.2007.53 is OK
- 10.1038/s41586-020-2649-2 is OK
- 10.1038/s41592-019-0686-2 is OK
- 10.1109/MCSE.2007.55 is OK
MISSING DOIs
- No DOI given, and none found for title: The ParaView Guide: A Parallel Visualization Appli...
- No DOI given, and none found for title: Cartopy: a cartographic python library with a Matp...
INVALID DOIs
- https://doi.org/10.1016/j.pepi.2017.07.001 is INVALID because of 'https://doi.org/' prefix
- https://doi.org/10.1016/j.pss.2009.04.008 is INVALID because of 'https://doi.org/' prefix
- https://doi.org/10.1016/j.icarus.2019.113541 is INVALID because of 'https://doi.org/' prefix
- https://doi.org/10.1016/B978-0-12-415845-0.00006-2 is INVALID because of 'https://doi.org/' prefix
- https://doi.org/10.1016/B978-012387582-2/50038-1 is INVALID because of 'https://doi.org/' prefix
Software report:
github.com/AlDanial/cloc v 1.90 T=0.03 s (1217.4 files/s, 143891.2 lines/s)
-------------------------------------------------------------------------------
Language files blank comment code
-------------------------------------------------------------------------------
Python 17 459 741 1095
TeX 1 42 2 433
Markdown 2 104 0 235
reStructuredText 8 218 276 144
YAML 3 12 15 66
TOML 1 6 0 44
DOS Batch 1 8 1 26
Jupyter Notebook 1 0 167 23
make 1 4 7 9
-------------------------------------------------------------------------------
SUM: 35 853 1209 2075
-------------------------------------------------------------------------------
Commit count by author:
103 AnkitBarik
69 Ankit Barik
6 Arthus
1 reguang
@athulpg007, @kjg136 β This is the review thread for the paper. All of our correspondence will happen here from now on. Thanks again for agreeing to participate!
π Please read the "Reviewer instructions & questions" in the first comment above, and generate your checklists by commenting @editorialbot generate my checklist
on this issue ASAP. As you go over the submission, please check any items that you feel have been satisfied. There are also links to the JOSS reviewer guidelines.
The JOSS review is different from most other journals. Our goal is to work with the authors to help them meet our criteria instead of merely passing judgment on the submission. As such, the reviewers are encouraged to submit issues and pull requests on the software repository. When doing so, please mention openjournals/joss-reviews#6677
so that a link is created to this thread (and I can keep an eye on what is happening). Please also feel free to comment and ask questions on this thread. In my experience, it is better to post comments/questions/suggestions as you come across them instead of waiting until you've reviewed the entire package.
We aim for the review process to be completed within about 4-6 weeks but please try to make a start ahead of this as JOSS reviews are by their nature iterative and any early feedback you may be able to provide to the author will be very helpful in meeting this schedule. Please get your review started as soon as possible!
Paper file info:
π Wordcount for paper.md
is 1983
β
The paper includes a Statement of need
section
License info:
π‘ License found: GNU General Public License v3.0
(Check here for OSI approval)
:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:
@AnkitBarik please take a look at the comments below. More details are available in the linked issues.
Thanks for addressing the above issues. Please also see: https://github.com/AnkitBarik/planetMagFields/issues/11
I have completed my initial review of the submission. This is a useful package for researchers working in the area of planetary magnetic fields by providing a fast method of plotting field data for various planets. The package is well written, along with documentation and examples to help new users get started.
My concerns raised earlier have been fixed, thanks. Please see further comments below:
My suggestion is to shorten the paper to ~5 pages or less, including references. It would then be easier for a diverse, non-specialist audienceto quickly get a high-level understanding of the package, and then refer to the documentation for more mathematical details, example Jupyter notebook etc.
Thanks!
@athulpg007 Thank you very much for the comments. I have made the following changes:
Thank you!
@editorialbot generate pdf
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I have completed my review of the submission, including the changes made in response to the first reviewer's comments. I agree that the package is useful for visualizing and analyzing planetary magnetic fields. To my knowledge, the authors are correct in their statement that no such package for a high-level language is currently established and therefore, the submission represents a valuable contribution. The documentation and examples are clear, making the package easy to understand and use.
I see no major issues and wish to only make two quick comments:
Thanks for the updates to the paper.
I have completed my review, and recommend to accept this submission.
@kjg136 @athulpg007 Thank you very much for your reviews. I have fixed the grammatical error.
@editorialbot generate pdf
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I made one last change to the paper, I updated the citation for PlanetMag
to the correct zenodo doi.
@editorialbot generate pdf
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Sorry for the spam on a Sunday, I added one final bit. I realized I had forgotten an Acknowledgements section. This has not led to any additional pages. :)
Cheers, Ankit
@editorialbot generate pdf
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@athulpg007, @kjg136 β Thanks for your thorough and constructive reviews!!
@AnkitBarik β I've opened a small PR with some minor edits to the manuscript, please take a look and merge or let me know what you think.
Once you've done that:
@dfm Thank you very much for the minor edits.
Thanks! Can you update the metadata on the Zenodo archive so that the title is the same as the paper?
Done !
@editorialbot set 1.4.3 as version
Done! version is now 1.4.3
@editorialbot set 10.5281/zenodo.4690524 as archive
Done! archive is now 10.5281/zenodo.4690524
@editorialbot check references
@editorialbot generate pdf
Reference check summary (note 'MISSING' DOIs are suggestions that need verification):
OK DOIs
- 10.1029/2012JE004159 is OK
- 10.1029/2018JE005835 is OK
- 10.1029/2021JE007055 is OK
- 10.1038/s41586-018-0468-5 is OK
- 10.1002/2018GL077312 is OK
- 10.1029/97JA03726 is OK
- 10.1029/JA092iA13p15329 is OK
- 10.1029/91JA01165 is OK
- 10.1006/icar.2002.6834 is OK
- 10.1186/s40623-020-01288-x is OK
- 10.1126/science.aat5434 is OK
- 10.1016/j.pepi.2011.05.013 is OK
- 10.1093/acrefore/9780190647926.013.31 is OK
- 10.1146/annurev-fluid-122109-160727 is OK
- 10.1201/b12985 is OK
- 10.1002/ggge.20071 is OK
- 10.2151/jmsj.2018-019 is OK
- 10.1007/s11214-023-00961-3 is OK
- 10.5281/zenodo.10602418 is OK
- 10.1186/s40623-020-01252-9 is OK
- 10.5281/zenodo.10598528 is OK
- 10.5281/zenodo.4080294 is OK
- 10.1029/2018GC007529 is OK
- 10.5281/zenodo.10864719 is OK
- 10.1109/MCSE.2007.53 is OK
- 10.1038/s41586-020-2649-2 is OK
- 10.1038/s41592-019-0686-2 is OK
- 10.1109/MCSE.2007.55 is OK
MISSING DOIs
- No DOI given, and none found for title: The ParaView Guide: A Parallel Visualization Appli...
- No DOI given, and none found for title: Cartopy: a cartographic python library with a Matp...
INVALID DOIs
- https://doi.org/10.1016/j.pepi.2017.07.001 is INVALID because of 'https://doi.org/' prefix
- https://doi.org/10.1016/j.pss.2009.04.008 is INVALID because of 'https://doi.org/' prefix
- https://doi.org/10.1016/j.icarus.2019.113541 is INVALID because of 'https://doi.org/' prefix
- https://doi.org/10.1016/B978-0-12-415845-0.00006-2 is INVALID because of 'https://doi.org/' prefix
- https://doi.org/10.1016/B978-012387582-2/50038-1 is INVALID because of 'https://doi.org/' prefix
:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:
@AnkitBarik β Can you also fix those invalid DOIs listed above? I think the "missing DOIs" are fine to ignore. Thanks!
@dfm Thank you for pointing it out. I have fixed the DOI errors.
@editorialbot check references
Reference check summary (note 'MISSING' DOIs are suggestions that need verification):
OK DOIs
- 10.1029/2012JE004159 is OK
- 10.1016/j.pepi.2017.07.001 is OK
- 10.1029/2018JE005835 is OK
- 10.1029/2021JE007055 is OK
- 10.1038/s41586-018-0468-5 is OK
- 10.1002/2018GL077312 is OK
- 10.1029/97JA03726 is OK
- 10.1029/JA092iA13p15329 is OK
- 10.1029/91JA01165 is OK
- 10.1006/icar.2002.6834 is OK
- 10.1186/s40623-020-01288-x is OK
- 10.1016/j.pss.2009.04.008 is OK
- 10.1126/science.aat5434 is OK
- 10.1016/j.icarus.2019.113541 is OK
- 10.1016/j.pepi.2011.05.013 is OK
- 10.1016/B978-0-12-415845-0.00006-2 is OK
- 10.1093/acrefore/9780190647926.013.31 is OK
- 10.1146/annurev-fluid-122109-160727 is OK
- 10.1016/B978-012387582-2/50038-1 is OK
- 10.1201/b12985 is OK
- 10.1002/ggge.20071 is OK
- 10.2151/jmsj.2018-019 is OK
- 10.1007/s11214-023-00961-3 is OK
- 10.5281/zenodo.10602418 is OK
- 10.1186/s40623-020-01252-9 is OK
- 10.5281/zenodo.10598528 is OK
- 10.5281/zenodo.4080294 is OK
- 10.1029/2018GC007529 is OK
- 10.5281/zenodo.10864719 is OK
- 10.1109/MCSE.2007.53 is OK
- 10.1038/s41586-020-2649-2 is OK
- 10.1038/s41592-019-0686-2 is OK
- 10.1109/MCSE.2007.55 is OK
MISSING DOIs
- No DOI given, and none found for title: The ParaView Guide: A Parallel Visualization Appli...
- No DOI given, and none found for title: Cartopy: a cartographic python library with a Matp...
INVALID DOIs
- None
@editorialbot generate pdf
:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:
@editorialbot recommend-accept
Attempting dry run of processing paper acceptance...
Reference check summary (note 'MISSING' DOIs are suggestions that need verification):
OK DOIs
- 10.1029/2012JE004159 is OK
- 10.1016/j.pepi.2017.07.001 is OK
- 10.1029/2018JE005835 is OK
- 10.1029/2021JE007055 is OK
- 10.1038/s41586-018-0468-5 is OK
- 10.1002/2018GL077312 is OK
- 10.1029/97JA03726 is OK
- 10.1029/JA092iA13p15329 is OK
- 10.1029/91JA01165 is OK
- 10.1006/icar.2002.6834 is OK
- 10.1186/s40623-020-01288-x is OK
- 10.1016/j.pss.2009.04.008 is OK
- 10.1126/science.aat5434 is OK
- 10.1016/j.icarus.2019.113541 is OK
- 10.1016/j.pepi.2011.05.013 is OK
- 10.1016/B978-0-12-415845-0.00006-2 is OK
- 10.1093/acrefore/9780190647926.013.31 is OK
- 10.1146/annurev-fluid-122109-160727 is OK
- 10.1016/B978-012387582-2/50038-1 is OK
- 10.1201/b12985 is OK
- 10.1002/ggge.20071 is OK
- 10.2151/jmsj.2018-019 is OK
- 10.1007/s11214-023-00961-3 is OK
- 10.5281/zenodo.10602418 is OK
- 10.1186/s40623-020-01252-9 is OK
- 10.5281/zenodo.10598528 is OK
- 10.5281/zenodo.4080294 is OK
- 10.1029/2018GC007529 is OK
- 10.5281/zenodo.10864719 is OK
- 10.1109/MCSE.2007.53 is OK
- 10.1038/s41586-020-2649-2 is OK
- 10.1038/s41592-019-0686-2 is OK
- 10.1109/MCSE.2007.55 is OK
MISSING DOIs
- No DOI given, and none found for title: The ParaView Guide: A Parallel Visualization Appli...
- No DOI given, and none found for title: Cartopy: a cartographic python library with a Matp...
INVALID DOIs
- None
:warning: Error preparing paper acceptance. The generated XML metadata file is invalid.
No declaration for attribute displaystyle of element mfrac
@AnkitBarik β I know that that error message is a little opaque, but my guess is that the issue here is with the use of dfrac
in the manuscript. Could you try switching it to frac
and we can try this again?
@dfm I have switched it to \frac and verified that it still looks fine on the pdf.
Submitting author: !--author-handle-->@AnkitBarik<!--end-author-handle-- (Ankit Barik) Repository: https://github.com/AnkitBarik/planetMagFields Branch with paper.md (empty if default branch): Version: 1.4.3 Editor: !--editor-->@dfm<!--end-editor-- Reviewers: @athulpg007, @kjg136 Archive: 10.5281/zenodo.4690524
Status
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Please avoid lengthy details of difficulties in the review thread. Instead, please create a new issue in the target repository and link to those issues (especially acceptance-blockers) by leaving comments in the review thread below. (For completists: if the target issue tracker is also on GitHub, linking the review thread in the issue or vice versa will create corresponding breadcrumb trails in the link target.)
Reviewer instructions & questions
@athulpg007 & @kjg136, your review will be checklist based. Each of you will have a separate checklist that you should update when carrying out your review. First of all you need to run this command in a separate comment to create the checklist:
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β¨ Please start on your review when you are able, and be sure to complete your review in the next six weeks, at the very latest β¨
Checklists
π Checklist for @kjg136
π Checklist for @athulpg007