Open editorialbot opened 1 month ago
Hello human, I'm @editorialbot, a robot that can help you with some common editorial tasks.
For a list of things I can do to help you, just type:
@editorialbot commands
For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:
@editorialbot generate pdf
Software report:
github.com/AlDanial/cloc v 1.90 T=0.07 s (1146.1 files/s, 263932.1 lines/s)
-------------------------------------------------------------------------------
Language files blank comment code
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HTML 18 532 223 4644
JavaScript 13 812 547 4232
Markdown 6 254 0 2491
CSS 11 177 137 1190
R 18 328 654 795
Rmd 4 251 361 210
TeX 1 16 0 164
YAML 5 31 27 156
CSV 1 0 0 78
XML 1 0 0 57
JSON 1 0 0 44
SVG 1 0 1 11
-------------------------------------------------------------------------------
SUM: 80 2401 1950 14072
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Commit count by author:
58 Paul Taconet
55 ptaconet
1 floriandeboissieu
Reference check summary (note 'MISSING' DOIs are suggestions that need verification):
OK DOIs
- 10.1016/S0034-4257(02)00084-6 is OK
- 10.1016/j.rse.2023.113963 is OK
- 10.1175/bams-d-15-00306.1 is OK
- 10.21105/joss.01686 is OK
- 10.5281/zenodo.5884351 is OK
- 10.32614/RJ-2018-009 is OK
- 10.1016/j.cageo.2016.08.020 is OK
- 10.5281/zenodo.7938190 is OK
- 10.5281/zenodo.3945409 is OK
MISSING DOIs
- No DOI given, and none found for title: A review of selected MODIS algorithms, data produc...
- No DOI given, and none found for title: R: A Language and Environment for Statistical Comp...
- No DOI given, and none found for title: terra: Spatial Data Analysis
- No DOI given, and none found for title: shiny: Web Application Framework for R
- No DOI given, and none found for title: The MODISTools package: an interface to the MODIS ...
INVALID DOIs
- https://doi.org/10.1016/j.techfore.2023.122357 is INVALID because of 'https://doi.org/' prefix
- https://doi.org/10.1016/j.rse.2017.06.031 is INVALID because of 'https://doi.org/' prefix
Paper file info:
📄 Wordcount for paper.md
is 2321
✅ The paper includes a Statement of need
section
License info:
🟡 License found: GNU General Public License v3.0
(Check here for OSI approval)
:warning: An error happened when generating the pdf.
@ptaconet Could you try to fix the compilation error?
@editorialbot generate pdf
:warning: An error happened when generating the pdf.
ok just checking
@editorialbot generate pdf
:warning: An error happened when generating the pdf.
@editorialbot commands
Hello @ptaconet, here are the things you can ask me to do:
# List all available commands
@editorialbot commands
# Get a list of all editors's GitHub handles
@editorialbot list editors
# Adds a checklist for the reviewer using this command
@editorialbot generate my checklist
# Set a value for branch
@editorialbot set joss-paper as branch
# Run checks and provide information on the repository and the paper file
@editorialbot check repository
# Check the references of the paper for missing DOIs
@editorialbot check references
# Generates the pdf paper
@editorialbot generate pdf
# Generates a LaTeX preprint file
@editorialbot generate preprint
# Get a link to the complete list of reviewers
@editorialbot list reviewers
@editorialbot generate pdf
:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:
Five most similar historical JOSS papers:
Rdataretriever: R Interface to the Data Retriever
Submitting author: @henrykironde
Handling editor: @fboehm (Active)
Reviewers: @rmhogervorst, @jsgalan
Similarity score: 0.6954
dataaimsr: An R Client for the Australian Institute of Marine Science Data Platform API which provides easy access to AIMS Data Platform
Submitting author: @dbarneche
Handling editor: @kthyng (Active)
Reviewers: @kthyng
Similarity score: 0.6918
forestatrisk: a Python package for modelling and forecasting deforestation in the tropics
Submitting author: @ghislainv
Handling editor: @kbarnhart (Retired)
Reviewers: @molgor, @ethanwhite
Similarity score: 0.6905
chirps: API Client for the CHIRPS Precipitation Data in R
Submitting author: @kauedesousa
Handling editor: @danielskatz (Active)
Reviewers: @danielskatz
Similarity score: 0.6788
nasapower: A NASA POWER Global Meteorology, Surface Solar Energy and Climatology Data Client for R
Submitting author: @adamhsparks
Handling editor: @karthik (Retired)
Reviewers: @arfon
Similarity score: 0.6787
⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.
@editorialbot generate pdf
:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:
Five most similar historical JOSS papers:
Rdataretriever: R Interface to the Data Retriever
Submitting author: @henrykironde
Handling editor: @fboehm (Active)
Reviewers: @rmhogervorst, @jsgalan
Similarity score: 0.6959
dataaimsr: An R Client for the Australian Institute of Marine Science Data Platform API which provides easy access to AIMS Data Platform
Submitting author: @dbarneche
Handling editor: @kthyng (Active)
Reviewers: @kthyng
Similarity score: 0.6925
forestatrisk: a Python package for modelling and forecasting deforestation in the tropics
Submitting author: @ghislainv
Handling editor: @kbarnhart (Retired)
Reviewers: @molgor, @ethanwhite
Similarity score: 0.6909
chirps: API Client for the CHIRPS Precipitation Data in R
Submitting author: @kauedesousa
Handling editor: @danielskatz (Active)
Reviewers: @danielskatz
Similarity score: 0.6801
nasapower: A NASA POWER Global Meteorology, Surface Solar Energy and Climatology Data Client for R
Submitting author: @adamhsparks
Handling editor: @karthik (Retired)
Reviewers: @arfon
Similarity score: 0.6793
⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.
@editorialbot generate pdf
:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:
Five most similar historical JOSS papers:
dataaimsr: An R Client for the Australian Institute of Marine Science Data Platform API which provides easy access to AIMS Data Platform
Submitting author: @dbarneche
Handling editor: @kthyng (Active)
Reviewers: @kthyng
Similarity score: 0.6825
Rdataretriever: R Interface to the Data Retriever
Submitting author: @henrykironde
Handling editor: @fboehm (Active)
Reviewers: @rmhogervorst, @jsgalan
Similarity score: 0.6799
forestatrisk: a Python package for modelling and forecasting deforestation in the tropics
Submitting author: @ghislainv
Handling editor: @kbarnhart (Retired)
Reviewers: @molgor, @ethanwhite
Similarity score: 0.6679
chirps: API Client for the CHIRPS Precipitation Data in R
Submitting author: @kauedesousa
Handling editor: @danielskatz (Active)
Reviewers: @danielskatz
Similarity score: 0.6651
riversCentralAsia: An R package to support data pre- and postprocessing for hydrological modelling with RS MINERVE
Submitting author: @mabesa
Handling editor: @crvernon (Active)
Reviewers: @mengqi-z, @tonyewong
Similarity score: 0.6638
⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.
@editorialbot generate pdf
:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:
Five most similar historical JOSS papers:
dataaimsr: An R Client for the Australian Institute of Marine Science Data Platform API which provides easy access to AIMS Data Platform
Submitting author: @dbarneche
Handling editor: @kthyng (Active)
Reviewers: @kthyng
Similarity score: 0.6779
Rdataretriever: R Interface to the Data Retriever
Submitting author: @henrykironde
Handling editor: @fboehm (Active)
Reviewers: @rmhogervorst, @jsgalan
Similarity score: 0.6677
chirps: API Client for the CHIRPS Precipitation Data in R
Submitting author: @kauedesousa
Handling editor: @danielskatz (Active)
Reviewers: @danielskatz
Similarity score: 0.6670
nasapower: A NASA POWER Global Meteorology, Surface Solar Energy and Climatology Data Client for R
Submitting author: @adamhsparks
Handling editor: @karthik (Retired)
Reviewers: @arfon
Similarity score: 0.6581
inAccessMod: An R package to automate data downloading and processing for AccessMod
Submitting author: @ptimoner
Handling editor: @arfon (Active)
Reviewers: @ConnorDonegan, @mponce0
Similarity score: 0.6537
⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.
@kthyng Hello ! I have made the modifications to the pdf, it seems to work now.
Potential reviewers for this paper could be any person from the proposed list of person matching with the following query : Language: R ; Area: Earth Sciences and Ecology ; Keywords: remote sensing (https://reviewers.joss.theoj.org/reviewers/search?language=29&area_id=6&keywords=remote+sensing&name=&commit=Update+search)
Additional reviewers might include : Annelise Tran, Jean-Baptise Ferret, Emmanuel Roux, Vincent Herbreteau
@ptaconet Great! For reviewers we're looking for an actual list of github handles, minus the "@", whether from the database or suggestions from your extended (non-conflicted) network. Thanks.
@kthyng here is the list :
AdamZhengLu yotarazona stevenpawley ethanwhite Carlitosh nmstreethran dlebauer makyol Pentaonia dkedar7 pederengelstad patrickcgray yongzesong usethedata jbferet
Hi @ptaconet and thanks for your submission! I am looking for some specific items to make sure your submission fits our requirements at a high level (not at the more detailed review level) before moving on to finding an editor or putting this on our waitlist if no relevant editors are available. I'll comment over time as I have a chance to go through them:
In the meantime, please take a look at the comments above ⬆️ from the editorialbot to address any DOI, license, or paper issues if you're able (there may not be any), or suggest reviewers.
@editorialbot check repository
Software report:
github.com/AlDanial/cloc v 1.90 T=0.07 s (1145.4 files/s, 263891.6 lines/s)
-------------------------------------------------------------------------------
Language files blank comment code
-------------------------------------------------------------------------------
HTML 18 532 223 4644
JavaScript 13 812 547 4232
Markdown 6 255 0 2496
CSS 11 177 137 1190
R 18 328 654 795
Rmd 4 251 361 210
TeX 1 16 0 167
YAML 5 31 27 156
CSV 1 0 0 78
XML 1 0 0 57
JSON 1 0 0 44
SVG 1 0 1 11
-------------------------------------------------------------------------------
SUM: 80 2402 1950 14080
-------------------------------------------------------------------------------
Commit count by author:
63 Paul Taconet
55 ptaconet
1 floriandeboissieu
Paper file info:
📄 Wordcount for paper.md
is 2351
✅ The paper includes a Statement of need
section
License info:
🟡 License found: GNU General Public License v3.0
(Check here for OSI approval)
@ptaconet I am going to ping the greater editorial board to take a look at this package to see if it is in scope in terms of substantial scholarly effort due to its relatively small size. This process will take a few weeks; thanks for your patience.
@editorialbot query scope
Submission flagged for editorial review.
@editorialbot generate pdf
:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:
Five most similar historical JOSS papers:
Geodata-Harvester: A Python package to jumpstart geospatial data extraction and analysis
Submitting author: @sebhaan
Handling editor: @hugoledoux (Active)
Reviewers: @lukasbeuster, @martibosch
Similarity score: 0.7109
dataaimsr: An R Client for the Australian Institute of Marine Science Data Platform API which provides easy access to AIMS Data Platform
Submitting author: @dbarneche
Handling editor: @kthyng (Active)
Reviewers: @kthyng
Similarity score: 0.7099
forestatrisk: a Python package for modelling and forecasting deforestation in the tropics
Submitting author: @ghislainv
Handling editor: @kbarnhart (Retired)
Reviewers: @molgor, @ethanwhite
Similarity score: 0.6995
inAccessMod: An R package to automate data downloading and processing for AccessMod
Submitting author: @ptimoner
Handling editor: @arfon (Active)
Reviewers: @ConnorDonegan, @mponce0
Similarity score: 0.6962
gcamfaostat: An R package to prepare, process, and synthesize FAOSTAT data for global agroeconomic and multisector dynamic modeling
Submitting author: @realxinzhao
Handling editor: @hugoledoux (Active)
Reviewers: @klau506, @HenriKajasilta
Similarity score: 0.6909
⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.
@editorialbot check repository
Software report:
github.com/AlDanial/cloc v 1.90 T=0.07 s (1170.1 files/s, 271253.2 lines/s)
-------------------------------------------------------------------------------
Language files blank comment code
-------------------------------------------------------------------------------
HTML 19 560 231 5091
JavaScript 13 812 547 4232
Markdown 8 343 0 2728
CSS 11 177 137 1190
R 18 328 654 795
Rmd 5 316 437 315
TeX 1 16 0 159
YAML 5 31 27 156
CSV 1 0 0 78
XML 1 0 0 57
JSON 1 0 0 44
SVG 1 0 1 11
-------------------------------------------------------------------------------
SUM: 84 2583 2034 14856
-------------------------------------------------------------------------------
Commit count by author:
68 Paul Taconet
55 ptaconet
1 floriandeboissieu
Paper file info:
📄 Wordcount for paper.md
is 1646
✅ The paper includes a Statement of need
section
License info:
🟡 License found: GNU General Public License v3.0
(Check here for OSI approval)
@ptaconet Ok we are moving forward with review! I need to finish my high level checks, then find a reviewer or put this on the waitlist.
@ptaconet Please shorten your paper. You can move material to your docs as needed, for example. Aim for 1000 words max, which you can check with @editorialbot check repository
.
@mikemahoney218 Can you edit this submission? (while the author is working on shortening the paper)
@editorialbot invite @mikemahoney218 as editor
Invitation to edit this submission sent!
@editorialbot assign me as editor
Happy to take this one on! I'll start reaching out to reviewers on Monday.
Submitting author: !--author-handle-->@ptaconet<!--end-author-handle-- (Paul Taconet) Repository: https://github.com/ptaconet/modisfast Branch with paper.md (empty if default branch): Version: 0.9.2 Editor: !--editor-->@mikemahoney218<!--end-editor-- Reviewers: Pending Managing EiC: Kristen Thyng
Status
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Author instructions
Thanks for submitting your paper to JOSS @ptaconet. Currently, there isn't a JOSS editor assigned to your paper.
@ptaconet if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). You can search the list of people that have already agreed to review and may be suitable for this submission.
Editor instructions
The JOSS submission bot @editorialbot is here to help you find and assign reviewers and start the main review. To find out what @editorialbot can do for you type: