search

openjournals / joss-reviews

Reviews for the Journal of Open Source Software
Creative Commons Zero v1.0 Universal
721 stars 38 forks source link

[PRE REVIEW]: Envismetrics: A Python-based software for electrochemical kinetic analysis #7237

Open editorialbot opened 1 month ago

editorialbot commented 1 month ago

Submitting author: !--author-handle-->@Woffee<!--end-author-handle-- (Omowunmi Sadik) Repository: https://github.com/Woffee/Envismetrics Branch with paper.md (empty if default branch): main Version: V0.9 Editor: !--editor-->@ppxasjsm<!--end-editor-- Reviewers: Pending Managing EiC: Kevin M. Moerman

Status

status

Status badge code:

HTML: <a href="https://joss.theoj.org/papers/242b4b10366201fd252ac2415e92ee86"><img src="https://joss.theoj.org/papers/242b4b10366201fd252ac2415e92ee86/status.svg"></a>
Markdown: [![status](https://joss.theoj.org/papers/242b4b10366201fd252ac2415e92ee86/status.svg)](https://joss.theoj.org/papers/242b4b10366201fd252ac2415e92ee86)

Author instructions

Thanks for submitting your paper to JOSS @https://github.com/Woffee. Currently, there isn't a JOSS editor assigned to your paper.

@https://github.com/Woffee if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). You can search the list of people that have already agreed to review and may be suitable for this submission.

Editor instructions

The JOSS submission bot @editorialbot is here to help you find and assign reviewers and start the main review. To find out what @editorialbot can do for you type:

@editorialbot commands
editorialbot commented 1 month ago

Hello human, I'm @editorialbot, a robot that can help you with some common editorial tasks.

For a list of things I can do to help you, just type:

@editorialbot commands

For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

@editorialbot generate pdf
editorialbot commented 1 month ago

:warning: An error happened when generating the pdf.

Kevin-Mattheus-Moerman commented 1 month ago

@editorialbot set main as branch

editorialbot commented 1 month ago

Done! branch is now main

Kevin-Mattheus-Moerman commented 1 month ago

@editorialbot check repository

editorialbot commented 1 month ago

Software report:

github.com/AlDanial/cloc v 1.90  T=0.14 s (311.4 files/s, 250161.0 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
CSV                              3              0              0          26003
HTML                            25            886             93           4259
Python                           9            538            390           2238
Markdown                         2            134              0            284
TeX                              1             14              0            162
JavaScript                       2             37             37            119
CSS                              1             22              6             99
INI                              1              7              0             22
-------------------------------------------------------------------------------
SUM:                            44           1638            526          33186
-------------------------------------------------------------------------------

Commit count by author:

    79  woffee
     2  Grant-Xue
editorialbot commented 1 month ago

Paper file info:

📄 Wordcount for paper.md is 2041

✅ The paper includes a Statement of need section

editorialbot commented 1 month ago

License info:

✅ License found: MIT License (Valid open source OSI approved license)

Kevin-Mattheus-Moerman commented 1 month ago

@editorialbot generate pdf

Kevin-Mattheus-Moerman commented 1 month ago

@editorialbot check references

editorialbot commented 1 month ago 
Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

✅ OK DOIs

- 10.1149/MA2023-01232772mtgabs is OK
- 10.2139/ssrn.4672175 is OK
- 10.1039/C9CP05527D is OK
- 10.21105/joss.02349 is OK
- 10.21105/joss.02940 is OK

🟡 SKIP DOIs

- No DOI given, and none found for title: KISSA, A SOFTWARE FOR FAST AND ACCURATE SIMULATION...
- No DOI given, and none found for title: Electrochemical methods: fundamentals and applicat...
- No DOI given, and none found for title: Inorganic electrochemistry: theory, practice and a...

❌ MISSING DOIs

- 10.1021/acsnano.0c01281.s001 may be a valid DOI for title: Redox flow batteries: how to determine electrochem...
- 10.1007/s12274-013-0372-0 may be a valid DOI for title: Koutecky-Levich analysis applied to nanoparticle m...
- 10.1021/ac60230a016 may be a valid DOI for title: Theory and application of cyclic voltammetry for m...
- 10.1002/elan.200302851 may be a valid DOI for title: An extended method for the practical evaluation of...
- 10.1515/pac-2014-5026 may be a valid DOI for title: Defining the transfer coefficient in electrochemis...

❌ INVALID DOIs

- https://doi.org/10.1016/j.chemosphere.2024.143057 is INVALID because of 'https://doi.org/' prefix
- https://doi.org/10.1016/j.ijhydene.2010.03.115 is INVALID because of 'https://doi.org/' prefix
- https://doi.org/10.1016/S0022-0728(03)00138-4 is INVALID because of 'https://doi.org/' prefix
- https://doi.org/10.1016/j.jelechem.2018.08.018 is INVALID because of 'https://doi.org/' prefix
editorialbot commented 1 month ago

:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:

editorialbot commented 1 month ago

Five most similar historical JOSS papers:

DearEIS - A GUI program for analyzing impedance spectra Submitting author: @vyrjana Handling editor: @jgostick (Active) Reviewers: @Aslan-Kosakian, @mdmurbach Similarity score: 0.7428

DiffCapAnalyzer: A Python Package for Quantitative Analysis of Total Differential Capacity Data Submitting author: @nicolet5 Handling editor: @jgostick (Active) Reviewers: @yangbai90, @WardLT Similarity score: 0.7194

KinESim: Pre-equilibrium kinetic simulation of electrochemical reactions Submitting author: @dap-biospec Handling editor: @kyleniemeyer (Active) Reviewers: @usethedata, @faustincarter Similarity score: 0.7079

Cellpy – an open-source library for processing and analysis of battery testing data Submitting author: @jepegit Handling editor: @mbarzegary (Active) Reviewers: @MaximevdHeijden, @TomTranter, @ma-sadeghi Similarity score: 0.7015

impedance.py: A Python package for electrochemical impedance analysis Submitting author: @mdmurbach Handling editor: @mbobra (Active) Reviewers: @ma-sadeghi, @EricaEgg Similarity score: 0.6882

⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.

Kevin-Mattheus-Moerman commented 1 month ago

@Woffee Dear author, thanks for this submission. I am the AEiC on this track and here to help process the initial steps. Before we proceed, please can you have a look at the following points:

Kevin-Mattheus-Moerman commented 1 month ago

@editorialbot invite @ppxasjsm as editor

editorialbot commented 1 month ago

Invitation to edit this submission sent!

ppxasjsm commented 1 month ago

@editorialbot assign @ppxasjsm as editor

editorialbot commented 1 month ago

Assigned! @ppxasjsm is now the editor

ppxasjsm commented 1 month ago

@Woffee, I am your editor for this submission. If you have any questions please reach out. In the mean time, could you please take a look at the suggested improvements from the EiC? If you could also suggest some reviewers for your submission that would be great. You can search the list of people that have already agreed to review and may be suitable for this submission. If you give me 3-5 suggestions for reviewers with their github handles without the '@', I can reach out to them for the review.

Grant-Xue commented 1 month ago

Thank you for your feedback and for assisting us with the initial steps of the submission process. I am one of the authors of the project, and we have addressed the issues mentioned in your message. Specifically, we:

Fixed the reported potential DOI issues by adding ISSN to the books and reformatting the DOI entries in the .bib file. Created and added a CONTRIBUTING.md file, and linked it in the README section of our GitHub repository.

Additionally, we will provide the reviewers' list shortly.

Grant-Xue commented 1 month ago

I hope this message finds you well. I wanted to inform you that the corresponding author for our submission is Dr. Omowunmi Sadik. Her contact email is omowunmi.sadik@njit.edu.

Please note that Dr. Sadik does not currently have a GitHub account. I kindly request that any important communications or updates related to the review process be sent to her via email, in addition to the GitHub review platform. She plans to create an account in the future.

Thank you for your assistance, and please let me know if any additional information is required.

ppxasjsm commented 1 month ago

Thank you @Grant-Xue. It is not necessary for the corresponding author to be involved in the submission per se. The review should still be visible for an account. Will you be the main contact for the submission to address any issues with the code etc?

Any reviewer suggestions would be massively appreciated to speed up the process of finding people to review this submission.

Grant-Xue commented 1 month ago

Dear JOSS Editor Toni Mey

Thank you for your message. I will be the main contact for the submission and will address any issues related to the code or the review process.

Regarding potential reviewers, I believe the following individuals have extensive knowledge in electrochemical analysis and would provide valuable feedback. However, they may not be registered as JOSS reviewers on GitHub:

1.

Professor Omotayo A. Arotiba Director, Center for Nanomaterials and Science Research Department of Chemistry, University of Johannesburg Email: @.*** 2.

Professor Ashok Mulchandani W. Ruel Johnson Chair in Environmental Engineering Distinguished Professor, Chemical & Environmental Engineering University of California, Riverside Email: @.*** 3.

Professor Emmanuel Iwuoha Senior Professor, SARChI (Tier 1) University of the Western Cape Email: @.*** 4.

Professor Sudipta Seal Department of Material Science and Engineering University of Central Florida Email: @.*** 5.

Professor Silvana Andreescu Egon Matijevic Chair of Chemistry / Co-Director of CAMP Department of Chemistry & Molecular Science Clarkson University Email: @.***

Please let me know if any additional information is needed or if I can assist further with the review process.

Best regards,

On Wed, Oct 9, 2024 at 11:27 AM Toni Mey @.***> wrote:

Thank you @Grant-Xue. It is not necessary for the corresponding author to be involved in the submission per se. The review should still be visible for an account. Will you be the main contact for the submission to address any issues with the

Thank you @Grant-Xue https://urldefense.com/v3/__https://github.com/Grant-Xue__;!!DLa72PTfQgg!Mf4qpbSXfZD8bE34dseB-iOtw_qxUFnqwiojqznugEVZ5DUxhEwUkIshPEIsYVM-LI_LYlQHptAH-uzVfTX41fOT$. It is not necessary for the corresponding author to be involved in the submission per se. The review should still be visible for an account. Will you be the main contact for the submission to address any issues with the code etc?

Any reviewer suggestions would be massively appreciated to speed up the process of finding people to review this submission.

— Reply to this email directly, view it on GitHub https://urldefense.com/v3/__https://github.com/openjournals/joss-reviews/issues/7237*issuecomment-2402653855__;Iw!!DLa72PTfQgg!Mf4qpbSXfZD8bE34dseB-iOtw_qxUFnqwiojqznugEVZ5DUxhEwUkIshPEIsYVM-LI_LYlQHptAH-uzVfcxjKs_q$, or unsubscribe https://urldefense.com/v3/__https://github.com/notifications/unsubscribe-auth/BLG6NPY53WZV4AY4XTBV2F3Z2VDNTAVCNFSM6AAAAABOJHU3KGVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDIMBSGY2TGOBVGU__;!!DLa72PTfQgg!Mf4qpbSXfZD8bE34dseB-iOtw_qxUFnqwiojqznugEVZ5DUxhEwUkIshPEIsYVM-LI_LYlQHptAH-uzVfUhsv-tv$ . You are receiving this because you were mentioned.Message ID: @.***>

-- [image: NJIT logo] https://www.njit.edu/ Huize Xue Ph.D. Student Material Science & Engineering 315 Tiernan Hall @.*** - (973)-954-3443

A Top 100 National University U.S. News & World Report

ppxasjsm commented 1 month ago

It may be easier if you could suggest someone from the existing reviewer list, as people who have not used github before, may not be familiar with our review process. Can you check this list please: the list of people

Grant-Xue commented 1 month ago

Dear Editor @ppxasjsm

Thank you for your message. I have reviewed the suggested improvements from the EiC and will work on addressing them promptly.

In the meantime, after searching for related works. I would like to propose the following reviewers for my submission:

mdmurbach EricaEgg alberto-battistel yaomz16

These reviewers have expertise in areas relevant to my submission, including electrochemistry, data analysis, and Python-based software.

Please feel free to let me know if there's anything else I can assist with.

ppxasjsm commented 3 weeks ago

Hi @mdmurbach, Would you be at all available to review this JOSS submission?

ppxasjsm commented 3 weeks ago

Hi @EricaEgg, is there any chance you are available to review this submission for JOSS?

Grant-Xue commented 1 week ago

@ppxasjsm, it seems the reviewers may not have seen the initial invitation. Shall we consider sending the request again to ensure it reaches them?