openjournals / joss-reviews

Reviews for the Journal of Open Source Software
Creative Commons Zero v1.0 Universal
722 stars 38 forks source link

[PRE REVIEW]: Sigma: Uncertainty Propagation for C++ #7367

Closed editorialbot closed 3 weeks ago

editorialbot commented 4 weeks ago

Submitting author: !--author-handle-->@jwaldrop107<!--end-author-handle-- (Jonathan Waldrop) Repository: https://github.com/QCUncertainty/sigma Branch with paper.md (empty if default branch): joss_paper Version: v0.1 Editor: !--editor-->@vissarion<!--end-editor-- Reviewers: @baxmittens, @YehorYudinIPP Managing EiC: Chris Vernon

Status

status

Status badge code:

HTML: <a href="https://joss.theoj.org/papers/46af69c48a681200c40fb5a9cebc6168"><img src="https://joss.theoj.org/papers/46af69c48a681200c40fb5a9cebc6168/status.svg"></a>
Markdown: [![status](https://joss.theoj.org/papers/46af69c48a681200c40fb5a9cebc6168/status.svg)](https://joss.theoj.org/papers/46af69c48a681200c40fb5a9cebc6168)

Author instructions

Thanks for submitting your paper to JOSS @jwaldrop107. Currently, there isn't a JOSS editor assigned to your paper.

@jwaldrop107 if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). You can search the list of people that have already agreed to review and may be suitable for this submission.

Editor instructions

The JOSS submission bot @editorialbot is here to help you find and assign reviewers and start the main review. To find out what @editorialbot can do for you type:

@editorialbot commands
editorialbot commented 4 weeks ago

Hello human, I'm @editorialbot, a robot that can help you with some common editorial tasks.

For a list of things I can do to help you, just type:

@editorialbot commands

For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

@editorialbot generate pdf
editorialbot commented 4 weeks ago

Software report:

github.com/AlDanial/cloc v 1.90  T=0.02 s (2356.9 files/s, 178500.5 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
C++                             17            133             10           1041
C/C++ Header                    14            161            891            432
Markdown                         4             53              0            418
YAML                             3              7             17            187
CMake                            8             36             29            170
TeX                              1              4              0             46
HTML                             1              3             19             45
CSS                              1              1              2              6
-------------------------------------------------------------------------------
SUM:                            49            398            968           2345
-------------------------------------------------------------------------------

Commit count by author:

    86  Jonathan M. Waldrop
     1  Ryan Richard
editorialbot commented 4 weeks ago
Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

✅ OK DOIs

- 10.1063/5.0196384 is OK

🟡 SKIP DOIs

- No DOI given, and none found for title: Uncertainty propagation with functionally correlat...
- No DOI given, and none found for title: Uncertainties: a Python package for calculations w...
- No DOI given, and none found for title: CMake
- No DOI given, and none found for title: Eigen

❌ MISSING DOIs

- None

❌ INVALID DOIs

- None
editorialbot commented 4 weeks ago

Paper file info:

📄 Wordcount for paper.md is 1064

✅ The paper includes a Statement of need section

editorialbot commented 4 weeks ago

License info:

✅ License found: Apache License 2.0 (Valid open source OSI approved license)

editorialbot commented 4 weeks ago

:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:

editorialbot commented 4 weeks ago

Five most similar historical JOSS papers:

MUQ: The MIT Uncertainty Quantification Library Submitting author: @mparno Handling editor: @pdebuyl (Active) Reviewers: @martinmodrak, @georgiastuart Similarity score: 0.7047

Grama: A Grammar of Model Analysis Submitting author: @zdelrosario Handling editor: @mjsottile (Retired) Reviewers: @BastinRobin, @rodrigokataishi Similarity score: 0.7025

PyThia: A Python package for Uncertainty Quantification based on non-intrusive polynomial chaos expansions Submitting author: @Nando-Farchmin Handling editor: @vissarion (Active) Reviewers: @ziyiyin97, @timokoch Similarity score: 0.7014

UM-Bridge: Uncertainty quantification and modeling bridge Submitting author: @linusseelinger Handling editor: @pdebuyl (Active) Reviewers: @georgiastuart, @Himscipy Similarity score: 0.6948

NoisySignalIntegration.jl: A Julia package for uncertainty evaluation of numeric integrals Submitting author: @nluetts Handling editor: @jbytecode (Active) Reviewers: @myousefi2016, @mseri Similarity score: 0.6937

⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.

editorialbot commented 4 weeks ago

Hello @robertjyates, here are the things you can ask me to do:


# List all available commands
@editorialbot commands

# Get a list of all editors's GitHub handles
@editorialbot list editors

# Adds a checklist for the reviewer using this command
@editorialbot generate my checklist

# Set a value for branch
@editorialbot set joss-paper as branch

# Run checks and provide information on the repository and the paper file
@editorialbot check repository

# Check the references of the paper for missing DOIs
@editorialbot check references

# Generates the pdf paper
@editorialbot generate pdf

# Generates a LaTeX preprint file
@editorialbot generate preprint

# Get a link to the complete list of reviewers
@editorialbot list reviewers
crvernon commented 3 weeks ago

@editorialbot invite @vissarion as editor

:wave: @vissarion can you take this one on as editor?

editorialbot commented 3 weeks ago

Invitation to edit this submission sent!

vissarion commented 3 weeks ago

@editorialbot assign me as editor

editorialbot commented 3 weeks ago

Assigned! @vissarion is now the editor

vissarion commented 3 weeks ago

:wave: @dannys4, @baxmittens, @YehorYudinIPP, @shahmoradi would any of you be willing to review this submission for JOSS? We carry out our checklist-driven reviews here in GitHub issues and follow these guidelines: https://joss.readthedocs.io/en/latest/review_criteria.html

baxmittens commented 3 weeks ago

Sounds interesting. I would do it if you like.

vissarion commented 3 weeks ago

@editorialbot add @baxmittens as reviewer

editorialbot commented 3 weeks ago

@baxmittens added to the reviewers list!

YehorYudinIPP commented 3 weeks ago

Hi! I would like to join as a reviewer as well.

vissarion commented 3 weeks ago

@editorialbot add @YehorYudinIPP as reviewer

editorialbot commented 3 weeks ago

@YehorYudinIPP added to the reviewers list!

vissarion commented 3 weeks ago

Thanks @YehorYudinIPP and @baxmittens for your quick responses!

vissarion commented 3 weeks ago

@editorialbot start review

editorialbot commented 3 weeks ago

OK, I've started the review over in https://github.com/openjournals/joss-reviews/issues/7404.