Closed georopon closed 3 years ago
What filename are you getting that error for?
If you're on Windows, you also have to be careful of the location you save files to. There's a limit on the maximum length of the full path to the file, so if you have folders with long names, or just a lot of nested folders, you can get errors trying to save files inside them.
I get this error to - the issue appears to be that in pdbfixer.py you have:
243 file = open(filename, 'r')
244 if _guessFileFormat(file, filename) == 'pdbx':
--> 245 self._initializeFromPDBx(file.read())
246 else:
247 self._initializeFromPDB(file)
Then the type check in the openmm PDBx reader sees a string and tries to open as a file. I'll make a pull request with the obvious fix.
i'have an error: OSError: [Errno 36] File name too long when run fixer for code: 5xy3 ribosome. help me.