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openmm / pdbfixer

PDBFixer fixes problems in PDB files
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pkg_resources is deprecated as an API #311

Closed kiyoon closed 1 month ago

kiyoon commented 1 month ago

Running pdbfixer shows this warning:

  .../python3.12/site-packages/pdbfixer/pdbfixer.py:61: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
    from pkg_resources import resource_filename

Using importlib should reduce the dependency of setuptools in runtime, and it's also available from old enough Python 3.7.

peastman commented 1 month ago

Thanks! I removed it. PDBFixer didn't even use that package. It was only there for a doctest.