openphacts / GLOBAL

Global project issues [private for now. owner lee harland]
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mappings between UMLS and MESH #364

Open danidi opened 8 years ago

danidi commented 8 years ago

We currently have two main disease intentifiers in the system, UMLS and MESH. The disease calls work with UMLS, the patent calls with Mesh, but there is no link between both. eg. obesity is http://linkedlifedata.com/resource/umls/id/C0028754 and http://identifiers.org/mesh/D009765

The disease information API call returns "seeAlso": "http://identifiers.org/mesh.2013/D009765", so we should actually have data for mappings available. Maybe @NuriaQueralt has suggestions for linksets here?

NuriaQueralt commented 8 years ago

i sent umls2mesh linksets for the IMS.

n

On 05/06/2016 03:26 PM, danidi wrote:

We currently have two main disease intentifiers in the system, UMLS and MESH. The disease calls work with UMLS, the patent calls with Mesh, but there is no link between both. eg. obesity is http://linkedlifedata.com/resource/umls/id/C0028754 and http://identifiers.org/mesh/D009765

The disease information API call returns "seeAlso": "http://identifiers.org/mesh.2013/D009765", so we should actually have data for mappings available. Maybe @NuriaQueralt https://github.com/NuriaQueralt has suggestions for linksets here?

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Núria Queralt Rosinach Research Programme on Biomedical Informatics (GRIB) Department of Experimental and Health Sciences Universitat Pompeu Fabra IMIM (Hospital del Mar Medical Research Institute) C/Dr. Aiguader 88, 08003 Barcelona, Spain Tel.: +34 93 316 0536 (1536) E-mail: nqueralt@imim.es Skype IM: nuriaqr76 http://ibi.imim.es/ https://nuriaqueralt.wordpress.com/