openpharma / mmrm

Mixed Models for Repeated Measures (MMRM) in R.
https://openpharma.github.io/mmrm/
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fix eigen deprecated warning #432

Closed clarkliming closed 8 months ago

clarkliming commented 8 months ago

close #431

github-actions[bot] commented 8 months ago

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Code Coverage Summary

Filename                    Stmts    Miss  Cover    Missing
------------------------  -------  ------  -------  ----------------------------
R/between-within.R             59       0  100.00%
R/component.R                  67       0  100.00%
R/cov_struct.R                 97       1  98.97%   407
R/empirical.R                   7       0  100.00%
R/fit.R                       229       3  98.69%   420, 481, 511
R/interop-car.R                72       3  95.83%   9, 48, 68
R/interop-emmeans.R            39       0  100.00%
R/interop-parsnip.R            59       1  98.31%   12
R/kenwardroger.R               92       2  97.83%   41, 63
R/mmrm-methods.R              140       0  100.00%
R/residual.R                    8       8  0.00%    10-31
R/satterthwaite.R             116      12  89.66%   238-249
R/skipping.R                    8       0  100.00%
R/testing.R                    64       4  93.75%   29, 31, 80, 82
R/tidiers.R                    72       2  97.22%   46-47
R/tmb-methods.R               288       3  98.96%   277-278, 338
R/tmb.R                       281       0  100.00%
R/utils-formula.R              27       0  100.00%
R/utils-nse.R                  16       0  100.00%
R/utils.R                     185      12  93.51%   277-287, 457, 486
R/zzz.R                        70      24  65.71%   7-22, 55-60, 90, 118, 138
src/chol_cache.h               63       0  100.00%
src/covariance.h              101       1  99.01%   177
src/derivatives.h             126       0  100.00%
src/empirical.cpp              72       0  100.00%
src/exports.cpp                47       0  100.00%
src/jacobian.cpp               47       1  97.87%   54
src/kr_comp.cpp                56       0  100.00%
src/mmrm.cpp                   76       0  100.00%
src/predict.cpp                93       0  100.00%
src/test-chol_cache.cpp        58       5  91.38%   9, 18, 26, 55, 62
src/test-covariance.cpp       123       5  95.93%   9, 29, 40, 61, 72
src/test-derivatives.cpp      108       7  93.52%   44, 53, 62, 85, 94, 106, 124
src/test-utils.cpp            195       7  96.41%   9, 16, 24, 34, 44, 57, 119
src/testthat-helpers.h         15       5  66.67%   36-37, 41, 50, 53
src/utils.h                    84       0  100.00%
TOTAL                        3260     106  96.75%

Diff against main

Filename      Stmts    Miss  Cover
----------  -------  ------  --------
TOTAL             0       0  +100.00%

Results for commit: 2724b6116ac2c515fea435db8d37b98ab40936bf

Minimum allowed coverage is 80%

:recycle: This comment has been updated with latest results

github-actions[bot] commented 8 months ago

Unit Tests Summary

    1 files     45 suites   24s :stopwatch:   491 tests   453 :white_check_mark: 38 :zzz: 0 :x: 1 885 runs  1 843 :white_check_mark: 42 :zzz: 0 :x:

Results for commit 2724b611.

clarkliming commented 8 months ago

from the log https://productionresultssa18.blob.core.windows.net/actions-results/c4ed8a73-05e2-4fea-8b5a-c1904d0253da/workflow-job-run-50650804-7f18-59c2-c478-be225add5b55/logs/job/job-logs.txt?rsct=text%2Fplain&se=2024-03-04T03%3A10%3A45Z&sig=GO3EXdP%2Fv7V6iRr%2FQDo6hJ2hYwhZfYi13ev5OM46Jmk%3D&sp=r&spr=https&sr=b&st=2024-03-04T03%3A00%3A40Z&sv=2021-12-02

it should be removed