refactor nxf state management in harmony leiden

[rcannood]

Changelog

• Updated to Viash 0.7.5.

• Removed deprecated variant: vdsl3 tags.

• Removed unused version: dev.

• multiomics/integration/harmony_leiden: Refactored data flow.

• ingestion/bd_rhapsody: Refactored data flow.

Issue ticket number and link

~Closes #xxxx~

Checklist before requesting a review

• [x] I have performed a self-review of my code

• [x] Conforms to the Contributor's guide

• Check the correct box. Does this PR contain:

  • [ ] Breaking changes
  • [ ] New functionality
  • [x] Major changes
  • [ ] Minor changes
  • [ ] Bug fixes

• [x] Proposed changes are described in the CHANGELOG.md

• [x] CI tests succeed!

[rcannood]

• viash-test ci-force
• integration test

[DriesSchaumont]

Errors are unrelated to this PR. So merge away!

[rcannood]

Woop woop!