add metrics from graph subtask to embedding task

danielStrobl commented 1 year ago

[ ] This submission was written on a forked copy of openproblems
[ ] Nextflow test pipeline is passing on this base branch of this pull request (include link to passed test on NF Tower found in GitHub Actions summary: )
[ ] If this pull request is not ready for review (including passing the Nextflow test pipeline), I will open this PR as a draft (click on the down arrow next to the "Create Pull Request" button)

[ ] This submission follows the guidelines in our Contributing document
[ ] I have checked to ensure there aren't other open Pull Requests for the same update/change

This PR will be evaluated on the basis of the following checks:

[ ] The task addresses a valid open problem in single-cell analysis
[ ] The latest version of master is merged and tested
[ ] The methods/metrics are imported to __init__.py and were tested in the pipeline
[ ] Method and metric decorators are annotated with paper title, year, author, code version, and date
[ ] The README gives an outline of the methods, metrics and datasets in the folder
[ ] The README provides a satisfactory task explanation (for new tasks)
[ ] The sample test data is appropriate to test implementation of all methods and metrics (for new tasks)

scottgigante-immunai commented 1 year ago

Not yet passing tests, converting back to draft

scottgigante-immunai commented 1 year ago

github-actions[bot] commented 1 year ago

openproblems-bio / openproblems