openproblems-bio / openproblems

Formalizing and benchmarking open problems in single-cell genomics
MIT License
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Harmonize batch integration dataset APIs #834

Closed scottgigante-immunai closed 1 year ago

github-actions[bot] commented 1 year ago

Current build status

scottgigante-immunai commented 1 year ago

@LuckyMD this is passing tests and ready for review

codecov[bot] commented 1 year ago

Codecov Report

Base: 95.59% // Head: 95.61% // Increases project coverage by +0.02% :tada:

Coverage data is based on head (babfbdc) compared to base (151e1e5). Patch coverage: 100.00% of modified lines in pull request are covered.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #834 +/- ## ========================================== + Coverage 95.59% 95.61% +0.02% ========================================== Files 187 187 Lines 5014 4999 -15 Branches 275 271 -4 ========================================== - Hits 4793 4780 -13 Misses 141 141 + Partials 80 78 -2 ``` | Flag | Coverage Δ | | |---|---|---| | unittests | `95.61% <100.00%> (+0.02%)` | :arrow_up: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=openproblems-bio#carryforward-flags-in-the-pull-request-comment) to find out more. | [Impacted Files](https://codecov.io/gh/openproblems-bio/openproblems/pull/834?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=openproblems-bio) | Coverage Δ | | |---|---|---| | [...enproblems/tasks/\_batch\_integration/\_common/api.py](https://codecov.io/gh/openproblems-bio/openproblems/pull/834?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=openproblems-bio#diff-b3BlbnByb2JsZW1zL3Rhc2tzL19iYXRjaF9pbnRlZ3JhdGlvbi9fY29tbW9uL2FwaS5weQ==) | `100.00% <100.00%> (+3.57%)` | :arrow_up: | | [.../\_batch\_integration/batch\_integration\_embed/api.py](https://codecov.io/gh/openproblems-bio/openproblems/pull/834?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=openproblems-bio#diff-b3BlbnByb2JsZW1zL3Rhc2tzL19iYXRjaF9pbnRlZ3JhdGlvbi9iYXRjaF9pbnRlZ3JhdGlvbl9lbWJlZC9hcGkucHk=) | `100.00% <100.00%> (ø)` | | | [...batch\_integration/batch\_integration\_feature/api.py](https://codecov.io/gh/openproblems-bio/openproblems/pull/834?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=openproblems-bio#diff-b3BlbnByb2JsZW1zL3Rhc2tzL19iYXRjaF9pbnRlZ3JhdGlvbi9iYXRjaF9pbnRlZ3JhdGlvbl9mZWF0dXJlL2FwaS5weQ==) | `100.00% <100.00%> (ø)` | | | [.../\_batch\_integration/batch\_integration\_graph/api.py](https://codecov.io/gh/openproblems-bio/openproblems/pull/834?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=openproblems-bio#diff-b3BlbnByb2JsZW1zL3Rhc2tzL19iYXRjaF9pbnRlZ3JhdGlvbi9iYXRjaF9pbnRlZ3JhdGlvbl9ncmFwaC9hcGkucHk=) | `100.00% <100.00%> (ø)` | | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=openproblems-bio). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=openproblems-bio)

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