openrif / vivo-isf-ontology

The "VIVO-ISF Ontology" is an OWL2 representation of the VIVO-ISF Data Standard
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OBI_0000306 has apparently been made obsolete. #666

Open marijane opened 7 years ago

marijane commented 7 years ago

While reviewing merge #665, I observed that this relationship is apparently obsolete, per ontobee: http://www.ontobee.org/ontology/OBI?iri=http://purl.obolibrary.org/obo/OBI_0000306

The usage tab in Protege tells me this relationship is used over 150 times in VIVO-ISF.

The editor's note indicates that it has been replaced by BFO_0000085, but this seems to be an error (http://www.ontobee.org/ontology/BFO?iri=http://purl.obolibrary.org/obo/BFO_0000085 is not found). I think http://www.ontobee.org/ontology/RO?iri=http://purl.obolibrary.org/obo/RO_0000085 is what's intended.

Do we have any best practices/processes/procedures for updating ontologies when terms become obsolete?