Closed angelwong121 closed 3 years ago
I won't get to checking this list this week, my focus is on recruiting new folk to help us with codelists. One observation I would make is I think it makes sense to do contraception and HRT as separate codelists. The main advantage being that they would be more reusable across a wider range of studies.
Code list clinical logic.
Where evidence is strong we have followed this, but where evidence is lacking or ambiguous we have taken a 'biologically plausibility' approach. For example, some evidence suggests that transdermal HRT is not associated with an increased risk of VTE due to bypassing first pass hepatic metabolism. However, as oral systemic estrogens are strongly associated with an increased risk of VTE we have elected to include transdermal estrogens. This logic has been followed throughout. Although it could be reasonably argued to take the opposite approach. The main downside to the opposite approach is that using weaker evidence to make decisions.
HRT:
Contraception
Specific
Thanks @hammoire According to this logic, we excluded search terms:
medroxyprogesterone
norethisterone
tibolone
And additionally included search terms:
tamoxifen
ospemifene
toremifene
The latest codelist for review: https://codelists.opensafely.org/codelist/user/angel-wong/hrtcontraceptive/2c47ef3b/#full-list @hammoire can you double check this and please sign this off if you are happy with this version:
POTENTIAL BIASES / NOTE: We included codes for oral form and patches and excluded vaginal cream/devices and nasal spray.
CLINICAL SIGN OFF & DATE:
EPIDEMIOLOGY SIGN OFF & DATE: Angel Wong @angelwong121 22/12/2020 16:03
SHARED WITH WIDER TEAM: Yes
FINAL SIGN OFF DATE (and apply label):
@angelwong121 I still see Tibolone under the Oestrogen search term. Other than that I think it's good to go
Tibolone (0604011Y0) Tibolone (0604011Y0AA) Tibolone 2.5mg tablets (0604011Y0AAAAAA)
Well spot! thanks @hammoire Revised version: https://codelists.opensafely.org/codelist/user/angel-wong/hrtcontraceptive/7a2908d0/#full-list
POTENTIAL BIASES / NOTE: We included codes for oral form and patches and excluded vaginal cream/devices and nasal spray.
CLINICAL SIGN OFF & DATE:
EPIDEMIOLOGY SIGN OFF & DATE: Angel Wong @angelwong121 22/12/2020 16:28
SHARED WITH WIDER TEAM: Yes
FINAL SIGN OFF DATE (and apply label):
Well spot! thanks @hammoire Revised version: https://codelists.opensafely.org/codelist/user/angel-wong/hrtcontraceptive/7a2908d0/#full-list
POTENTIAL BIASES / NOTE: We included codes for oral form and patches and excluded vaginal cream/devices and nasal spray.
CLINICAL SIGN OFF & DATE: William Elson @hammoire 22/12/2020 16:29
EPIDEMIOLOGY SIGN OFF & DATE: Angel Wong @angelwong121 22/12/2020 16:28
SHARED WITH WIDER TEAM: Yes
FINAL SIGN OFF DATE (and apply label):
Rationale of developing the codelist: This is used for the anticoagulant use before COVID project. We will identify people prescribed hormone replacement therapy/ contraceptives as covariate to be adjusted for. Because HRT/contraceptive increases the risk of venous thromboembolism.
URL of codelist builder: https://codelists.opensafely.org/builder/4c4a497a/search/estradiol/ Coding system: pseudo BNF
Keyword searched in codelist builder:
Before generating the codelist here, I excluded codes indicating vaginal cream/devices and nasal spray. I also excluded BNF 0605 chapter
Hypothalamic and pituitary hormones and anti, oestrogens
. Please note that some medicines belong to BNF 08 chapterMalignant Disease and Immunosuppression
, because they can also be used as contraceptives which can increase risk of thrombotic events so they were included in this version.The codelist for review: angel-wong-hrtcontraceptive-4c4a497a.xlsx