Open emprestige opened 3 months ago
edited to add clarity of diagnosis positions for emergency admissions and exclusion criteria
edited to change definition of influenza-like-illness for Maximally Sensitive Mild Influenza definition - presence of code from cough codelist no longer required
edited to add detail to maximally sensitive phenotypes for RSV, flu, and COVID-19
Maximally Specific
Mild RSV
Severe RSV
At least one ICD-10 diagnosis code for RSV or bronchiolitis in the first or second position in the HES APC (codelist)
Maximally Sensitive
Mild RSV
Inclusion Criteria
Exclusion Criteria
Diagnosis code in SNOMED CT for influenza, pneumonia, human metapneumovirus, rhinovirus, adenovirus, parainfluenza, enterovirus, mycoplasma pneumonia, bronchitis, sinusitis, tonsillitis, laryngitis, pertussis, or coronavirus, including COVID-19, within the one-month period (±) of respiratory symptoms or receipt of a relevant prescription as noted in the inclusion criteria above (codelist)
Severe RSV
Inclusion Criteria
Exclusion Criteria
ICD-10 diagnosis code in any position in HES APC for influenza, pneumonia, human metapneumovirus, rhinovirus, adenovirus, parainfluenza, enterovirus, mycoplasma pneumonia, bronchitis, sinusitis, tonsillitis, laryngitis, pertussis, or coronavirus, including COVID-19, within the one-month period (±) of respiratory symptoms (codelist)
Maximally Specific
Mild Influenza
At least one SNOMED CT code for influenza (codelist)
Severe Influenza
At least one ICD-10 diagnosis code for influenza in the first or second position in the HES APC (codelist)
Maximally Sensitive
Mild Influenza
Inclusion Criteria
Exclusion Criteria
Diagnosis code in SNOMED CT for RSV, pneumonia, human metapneumovirus, rhinovirus, adenovirus, parainfluenza, enterovirus, mycoplasma pneumonia, tonsillitis, pertussis, or coronavirus, including COVID-19, within the one-month period (±) of respiratory symptoms or receipt of a relevant prescription as noted in the inclusion criteria above (codelist)
Severe Influenza
Inclusion Criteria
Exclusion Criteria
ICD-10 diagnosis code in any position in HES APC for RSV, pneumonia, human metapneumovirus, rhinovirus, adenovirus, parainfluenza, enterovirus, mycoplasma pneumonia, tonsillitis, pertussis, or coronavirus, including COVID-19, within the one-month period (±) of respiratory symptoms (codelist)
Maximally Specific
Mild COVID-19
At least one SNOMED CT code for COVID-19 (codelist)
Severe COVID-19
At least one ICD-10 diagnosis code for COVID-19 in the first or second position in the HES APC (codelist)
Maximally Sensitive
Mild COVID-19
Inclusion Criteria
Exclusion Criteria
Diagnosis code in SNOMED CT for RSV, influenza, pneumonia, human metapneumovirus, rhinovirus, adenovirus, parainfluenza, enterovirus, mycoplasma pneumonia, bronchitis, sinusitis, tonsillitis, pertussis, laryngitis, or specific coronavirus strains which are not COVID-19 within the one-month period (±) of respiratory symptoms or receipt of a relevant prescription as noted in the inclusion criteria above (codelist)
Severe COVID-19
Inclusion Criteria
Exclusion Criteria
ICD-10 diagnosis code in any position in HES APC for RSV, influenza, pneumonia, human metapneumovirus, rhinovirus, adenovirus, parainfluenza, enterovirus, mycoplasma pneumonia, bronchitis, sinusitis, tonsillitis, pertussis, laryngitis, or specific coronavirus strains which are not COVID-19 within the one-month period (±) of respiratory symptoms (codelist)
Maximally Sensitive
Mild Overall Respiratory Virus
Inclusion Criteria
Exclusion Criteria
Diagnosis code in SNOMED CT for metapneumovirus, rhinovirus, adenovirus, parainfluenza, enterovirus, mycoplasma pneumonia or pertussis within the one-month period (±) of respiratory symptoms (codelist)
Severe Overall Respiratory Virus
Inclusion Criteria
Exclusion Criteria
ICD-10 diagnosis code in any position in HES APC for metapneumovirus, rhinovirus, adenovirus, parainfluenza, enterovirus, mycoplasma pneumonia or pertussis within the one-month period (±) of respiratory symptoms (codelist)