openvar variantValidator issues

openvar / variantValidator

Public repository for VariantValidator project

GNU Affero General Public License v3.0

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issues

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Required information for ENST00000305799.8 is missing from the Universal Transcript Archive

#629 ifokkema opened 1 week ago
1
REST APIs broken for LOVD, depending on the internal method used to call it

#628 ifokkema opened 1 week ago
1
variantValidator is not returning a correct gNomen

#627 RanWei1987 opened 2 weeks ago
7
restore select_transcripts = select

#626 Peter-J-Freeman closed 3 weeks ago
0
Vv ensembl dev susmi

#625 Peter-J-Freeman closed 3 weeks ago
0
No warning that transcript version is not the most recent

#624 leicray opened 1 month ago
0
Vv ensembl dev susmi

#623 Peter-J-Freeman closed 1 month ago
0
add code to warn of unsupported transcripts and suggest an alternativ…

#622 Peter-J-Freeman closed 1 month ago
0
Additiona of a new test for genomic ins interval error

#621 Peter-J-Freeman closed 1 month ago
0
Additiona of a new test for genomic ins interval error

#620 Peter-J-Freeman closed 1 month ago
0
Vv ensembl dev susmi

#619 Peter-J-Freeman closed 1 month ago
0
An MD file which describes the HGVS formats we do and do not suppoort and what we are working on

#618 Peter-J-Freeman opened 1 month ago
1
Accept a VCF line

#617 Peter-J-Freeman opened 1 month ago
0
Use the "full" variant description for intronic variants

#616 ifokkema opened 1 month ago
23
Vv ensembl dev susmi

#615 Peter-J-Freeman opened 2 months ago
0
Vv ensembl develop pete

#614 Peter-J-Freeman closed 2 months ago
0
Update develop with latest master version

#613 Peter-J-Freeman closed 2 months ago
0
Select transcripts bug fixed

#612 Peter-J-Freeman closed 2 months ago
0
code to add in gene symbols if tx variant exists but gene symbol is m…

#611 Peter-J-Freeman closed 2 months ago
0
code to add in gene symbols if tx variant exists but gene symbol is m…

#610 Peter-J-Freeman closed 2 months ago
0
start work on https://github.com/openvar/variantValidator/issues/600

#609 Peter-J-Freeman closed 2 months ago
0
updates to accept 2024_04 validator db

#608 Peter-J-Freeman closed 2 months ago
0
Add code to trace RefSeqGene insert errors

#607 Peter-J-Freeman closed 2 months ago
0
Add code to trace RefSeqGene insert errors

#606 Peter-J-Freeman closed 2 months ago
0
VV text entry at the top of each page

#605 Peter-J-Freeman closed 2 months ago
11
update populate code to identify GRCh37 FE mappings with gene_symbol …

#604 Peter-J-Freeman closed 2 months ago
0
LOVD associated improvement requests and bugs

#603 John-F-Wagstaff opened 2 months ago
8
update populate code to identify GRCh37 FE mappings with gene_symbol …

#602 Peter-J-Freeman closed 2 months ago
0
update populate code to identify GRCh37 FE mappings

#601 Peter-J-Freeman closed 2 months ago
0
Add support for RefSeqFE and intergenic mappings to RefSeqGenes

#600 Peter-J-Freeman opened 2 months ago
22
update populate to nandle RSGFE elements

#599 Peter-J-Freeman closed 2 months ago
0
Fix issue 280d

#598 Peter-J-Freeman closed 2 months ago
0
LOVD Endpoint Internal Server Error

#597 nathandloria closed 2 months ago
5
Add a method to link to a validation result in the web interface

#596 ifokkema closed 2 months ago
21
Unsupported transcripts

#595 leicray closed 3 months ago
5
Transcript fusion r. description

#594 leicray opened 3 months ago
3
Internal server error: "local variable 'result' referenced before assignment"

#593 ifokkema closed 2 months ago
9
Develop

#592 Peter-J-Freeman closed 4 months ago
0
Ci

#591 Peter-J-Freeman closed 4 months ago
0
Fix issue 280d

#590 Peter-J-Freeman closed 4 months ago
0
Remove print statements

#589 Peter-J-Freeman closed 4 months ago
0
Develop

#588 Peter-J-Freeman closed 4 months ago
0
Ci

#587 Peter-J-Freeman closed 4 months ago
0
Update README.md

#586 leicray closed 4 months ago
0
Incorrect warning for a deletion not conforming to the 3' rule

#585 leicray closed 4 months ago
5
Deletions in .r generate warning for auto-mapping to long form of .c (eg .r:6_8del -> .c:6_8delTTG) when the original is valid

#584 John-F-Wagstaff opened 5 months ago
6
Update status badge for Jonkins live

#583 Peter-J-Freeman closed 5 months ago
0
Position based transcript search to be added to genes to transcript endpoint

#582 John-F-Wagstaff opened 5 months ago
0
Develop

#581 Peter-J-Freeman closed 5 months ago
0
Ci

#580 Peter-J-Freeman closed 5 months ago
0