openvar / variantValidator

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NG_053115.1:g.4659_4750delinsT causes server error #531

Open leicray opened 1 year ago

leicray commented 1 year ago

Describe the bug A user has been repeatedly trying to validate the variant NG_053115.1:g.4659_4750delinsT. The variant does not validate for GRCh37 or GRCh38 and results in ERROR messages being sent to the sysadmins.

The on-screen error messages are:

Unable to validate the submitted variant NG_053115.1:g.4659_4750delinsT against the GRCh37 assembly.

and

Unable to validate the submitted variant NG_053115.1:g.4659_4750delinsT against the GRCh38 assembly.

Reference sequence NG_053115.1 is valid and corresponds to the ODAD4 gene. The corresponding MANE Select transcript is NM_031421.5.

Although it's not entirely reproducible, failed attempts to validate this variant description seem to interfere with subsequent attempts to validate variant descriptions that are known to be valid.