Update gtfparse to support pyarrow >=0.15

openvax / gtfparse

Parsing tools for GTF (gene transfer format) files

Apache License 2.0

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Update gtfparse to support pyarrow >=0.15 #47

Open jdcla opened 1 month ago

jdcla commented 1 month ago

Dependency requirements of pyarrow<14.1.0 and >=14.0.2 limit gtfparse to be used with other bioinformatics tools.

jdcla commented 4 days ago

Is it possible to take a look at this @iskandr ? Is there any reason why gtfparse has such restricted requirements? Currently, these restrictions make it impossible to use gtfparse with a more recent version of biobear, which feature several important improvements for me.