Update pandas.read_table to pandas.read_csv

openvax / mhcflurry

Peptide-MHC I binding affinity prediction

http://openvax.github.io/mhcflurry/

Apache License 2.0

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Update pandas.read_table to pandas.read_csv #137

Closed susannasiebert closed 5 years ago

susannasiebert commented 5 years ago

read_table was deprecated in version 0.24.0 and replaced with read_csv (see http://pandas.pydata.org/pandas-docs/stable//reference/api/pandas.read_table.html)

coveralls commented 5 years ago

Coverage remained the same at 43.939% when pulling bbc3894f1dca08c02e954ee39d54bd740337fce6 on susannasiebert:read_csv into 444fd5f34713df034ca17620da63ee06e596339d on openvax:master.

timodonnell commented 5 years ago

Great, thanks for the fix @susannasiebert !

susannasiebert commented 5 years ago

@timodonnell thanks for the quick merge. Do you have a timeline for when this will get deployed in a new release?

timodonnell commented 5 years ago

@susannasiebert No problem, just pushed version 1.2.3 now with the change, let me know if you have any issues with it: https://pypi.org/project/mhcflurry/