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openvax / mhcflurry

Peptide-MHC I binding affinity prediction
http://openvax.github.io/mhcflurry/
Apache License 2.0
191 stars 57 forks source link

mhcflurry-downloads fetch error #172

Closed suraj-gattani closed 4 years ago

suraj-gattani commented 4 years ago

I was trying to install mhcflurry inside a docker image (ubuntu os). I could pip install mhcflurry but later when I ran "mhcflurry-downloads fetch" it gave me the following error.

Traceback (most recent call last): File "/usr/local/bin/mhcflurry-downloads", line 8, in <module> sys.exit(run()) File "/usr/local/lib/python3.8/dist-packages/mhcflurry/downloads_command.py", line 123, in run command_functions[args.subparser_name](args) File "/usr/local/lib/python3.8/dist-packages/mhcflurry/downloads_command.py", line 183, in fetch_subcommand default = not args.download_name and info['metadata']['default'] KeyError: 'default'

npatel-ah commented 4 years ago

@suraj-gattani I am getting the same error, how did you resolve it?

suraj-gattani commented 4 years ago

I actually downloaded the class1-presentation model only and it started working for me. I think you can download all of them separately and it should work for you as well.

npatel-ah commented 4 years ago

Thanks a lot for the response.

timodonnell commented 4 years ago

Oops, this was caused by a silly typo. I just pushed version 2.0.1 to PyPI to fix it. Let me know if you encounter it again.

npatel-ah commented 4 years ago

Thanks, it's working now 👍