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openvax / neoantigen-vaccine-pipeline

Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines
Apache License 2.0
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Fixing TMPDIR path in Mark Duplicates rule. #117

Closed julia326 closed 5 years ago

julia326 commented 5 years ago

Also fixing MuTect2 use of reference (I moved the reference path to the params directive, not input)