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openvax / neoantigen-vaccine-pipeline

Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines
Apache License 2.0
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QC tools for RNA and DNA #120

Open julia326 opened 6 years ago

julia326 commented 6 years ago

Add these to the pipeline:

RNA-SeQC: https://software.broadinstitute.org/cancer/cga/rnaseqc_run DNA: Picard alignment summary

jzgithub1 commented 4 years ago

@julia326 I would like to give this a try. Do you still need this task to be done?