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openvax / neoantigen-vaccine-pipeline

Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines
Apache License 2.0
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Check config file for obvious mistakes #127

Open iskandr opened 6 years ago

iskandr commented 6 years ago

We should at least warn users if FASTQ file paths for r1 and r2 are the same or if they have different lane numbers e.g. "L001" and "L002".