openvax / neoantigen-vaccine-pipeline

Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines
Apache License 2.0
75 stars 25 forks source link

Identify known driver variants from the somatic VCF #90

Open iskandr opened 6 years ago

iskandr commented 6 years ago

Unclear if this should be included as part of Vaxrank or as a separate command with its own output, but several collaborators want us to highlight when known drivers such as IDH1 R132 variants are present. We should at the very least use CiViC.