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openvax / topiary

Predict mutated T-cell epitopes from sequencing data
Apache License 2.0
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Test failing after netMHCpan update #63

Closed julia326 closed 7 years ago

julia326 commented 7 years ago

Using netMHCpan 3.0 as the netMHCpan binary causes this failure:

FAIL: test.test_mutant_epitope_predictions_class1.test_epitope_prediction_without_padding
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Traceback (most recent call last):
  File "/Users/julia/Envs/topiary/lib/python2.7/site-packages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File "/Users/julia/code/topiary/test/test_mutant_epitope_predictions_class1.py", line 68, in test_epitope_prediction_without_padding
    eq_(len(strong_binders), 4)
AssertionError: 5 != 4