Closed GSDenghj closed 6 years ago
What happens if you type netMHCpan
in a shell?
My guess is your netMHCpan installation may not be working. The --mhc-predictor-models-path
flag I believe is only used with MHCflurry not netMHCpan.
Yes, you're right, my netMHCpan wasn't in my PATH, it's necessary to set $PATH, $NETMHCpan and $TMP_DIR before run topiary.
Best wishes!
Hi,
There was error when I running topiary, with ' --mhc-predictor netmhcpan ' , it exit with error: 'OSError: [Errno 13] Permission denied'. And if give ' --mhc-predictor-models-path ', it exit with error:'TypeError: NetMHCpan() got an unexpected keyword argument 'models_path'', How to fix it?