openvax / topiary

Predict mutated T-cell epitopes from sequencing data
Apache License 2.0
27 stars 9 forks source link

Request for inclusion of wild-type peptide binding affinity #87

Open ARChakravarthy opened 5 years ago

ARChakravarthy commented 5 years ago

Hi there ,

I'm just requesting the addition of the ability to compute the binding strength for the corresponding wild-type peptides for SNV-derived peptides.

As a stop-gap workaround, is it useful to just supply an altered variant file where the variant column is set to be the same as the wild-type, or to flip the two round so I can get Topiary to chuck out affinity estimates for those peptides?